Literature DB >> 25046587

Aggregation and segregation of confined active particles.

Xingbo Yang1, M Lisa Manning, M Cristina Marchetti.   

Abstract

We simulate a model of self-propelled disks with soft repulsive interactions confined to a box in two dimensions. For small rotational diffusion rates, monodisperse disks spontaneously accumulate at the walls. At low densities, interaction forces between particles are strongly inhomogeneous, and a simple model predicts how these inhomogeneities alter the equation of state. At higher densities, collective effects become important. We observe signatures of a jamming transition at a packing fraction ϕ ∼ 0.88, which is also the jamming point for non-active athermal monodisperse disks. At this ϕ, the system develops a critical finite active speed necessary for wall aggregation. At packing fractions above ϕ ∼ 0.6, the pressure decreases with increasing density, suggesting that strong interactions between particles are affecting the equation of state well below the jamming transition. A mixture of bidisperse disks segregates in the absence of any adhesion, identifying a new mechanism that could contribute to cell sorting in embryonic development.

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Year:  2014        PMID: 25046587     DOI: 10.1039/c4sm00927d

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  15 in total

1.  Physics of active jamming during collective cellular motion in a monolayer.

Authors:  Simon Garcia; Edouard Hannezo; Jens Elgeti; Jean-François Joanny; Pascal Silberzan; Nir S Gov
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-01       Impact factor: 11.205

2.  Shape control and compartmentalization in active colloidal cells.

Authors:  Matthew Spellings; Michael Engel; Daphne Klotsa; Syeda Sabrina; Aaron M Drews; Nguyen H P Nguyen; Kyle J M Bishop; Sharon C Glotzer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-07       Impact factor: 11.205

3.  Hysteresis, reentrance, and glassy dynamics in systems of self-propelled rods.

Authors:  Hui-Shun Kuan; Robert Blackwell; Loren E Hough; Matthew A Glaser; M D Betterton
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-12-31

4.  Statistical mechanics of transport processes in active fluids: Equations of hydrodynamics.

Authors:  Katherine Klymko; Dibyendu Mandal; Kranthi K Mandadapu
Journal:  J Chem Phys       Date:  2017-11-21       Impact factor: 3.488

5.  Correlating cell shape and cellular stress in motile confluent tissues.

Authors:  Xingbo Yang; Dapeng Bi; Michael Czajkowski; Matthias Merkel; M Lisa Manning; M Cristina Marchetti
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-14       Impact factor: 11.205

Review 6.  Using cell deformation and motion to predict forces and collective behavior in morphogenesis.

Authors:  Matthias Merkel; M Lisa Manning
Journal:  Semin Cell Dev Biol       Date:  2016-08-02       Impact factor: 7.727

7.  Unjamming and cell shape in the asthmatic airway epithelium.

Authors:  Jin-Ah Park; Jae Hun Kim; Dapeng Bi; Jennifer A Mitchel; Nader Taheri Qazvini; Kelan Tantisira; Chan Young Park; Maureen McGill; Sae-Hoon Kim; Bomi Gweon; Jacob Notbohm; Robert Steward; Stephanie Burger; Scott H Randell; Alvin T Kho; Dhananjay T Tambe; Corey Hardin; Stephanie A Shore; Elliot Israel; David A Weitz; Daniel J Tschumperlin; Elizabeth P Henske; Scott T Weiss; M Lisa Manning; James P Butler; Jeffrey M Drazen; Jeffrey J Fredberg
Journal:  Nat Mater       Date:  2015-08-03       Impact factor: 43.841

8.  Emergent vortices in populations of colloidal rollers.

Authors:  Antoine Bricard; Jean-Baptiste Caussin; Debasish Das; Charles Savoie; Vijayakumar Chikkadi; Kyohei Shitara; Oleksandr Chepizhko; Fernando Peruani; David Saintillan; Denis Bartolo
Journal:  Nat Commun       Date:  2015-06-19       Impact factor: 14.919

9.  Acoustic trapping of active matter.

Authors:  Sho C Takatori; Raf De Dier; Jan Vermant; John F Brady
Journal:  Nat Commun       Date:  2016-03-10       Impact factor: 14.919

10.  Repulsive cues combined with physical barriers and cell-cell adhesion determine progenitor cell positioning during organogenesis.

Authors:  Azadeh Paksa; Jan Bandemer; Burkhard Hoeckendorf; Nitzan Razin; Katsiaryna Tarbashevich; Sofia Minina; Dana Meyen; Antonio Biundo; Sebastian A Leidel; Nadine Peyrieras; Nir S Gov; Philipp J Keller; Erez Raz
Journal:  Nat Commun       Date:  2016-04-18       Impact factor: 14.919

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