Literature DB >> 25044955

Surface modification of solid-state nanopores for sticky-free translocation of single-stranded DNA.

Zhipeng Tang1, Bo Lu, Qing Zhao, Jiajun Wang, Kaifu Luo, Dapeng Yu.   

Abstract

Nanopore technology is one of the most promising approaches for fast and low-cost DNA sequencing application. Single-stranded DNA detection is primary objective in such device, while solid-state nanopores remain less explored than their biological counterparts due to bio-molecule clogging issue caused by surface interaction between DNA and nanopore wall. By surface coating a layer of polyethylene glycol (PEG), solid-state nanopore can achieve long lifetime for single-stranded DNA sticky-free translocation at pH 11.5. Associated with elimination of non-specific binding of molecule, PEG coated nanopore presents new surface characteristic as less hydrophility, lower 1/f noise, and passivated surface charge responsiveness on pH. Meanwhile, conductance blockage of single-stranded DNA is found to be deeper than double-stranded DNA, which can be well described by a string of blobs model for a quasi-equilibrium state polymer in constraint space.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA sequencing; single-stranded DNA detection; solid-state nanopores; string of blobs; surface modification

Mesh:

Substances:

Year:  2014        PMID: 25044955     DOI: 10.1002/smll.201401091

Source DB:  PubMed          Journal:  Small        ISSN: 1613-6810            Impact factor:   13.281


  6 in total

1.  Molecular Dynamics Simulation of a Single Carbon Chain through an Asymmetric Double-Layer Graphene Nanopore for Prolonging the Translocation Time.

Authors:  Yaohong Zhou; Haidong Wang
Journal:  ACS Omega       Date:  2022-05-06

Review 2.  Analysis Method of the Ion Current-Time Waveform Obtained from Low Aspect Ratio Solid-state Nanopores.

Authors:  Masateru Taniguchi
Journal:  Anal Sci       Date:  2019-12-06       Impact factor: 1.967

3.  Intrinsic and membrane-facilitated α-synuclein oligomerization revealed by label-free detection through solid-state nanopores.

Authors:  Rui Hu; Jiajie Diao; Ji Li; Zhipeng Tang; Xiaoqing Li; Jeremy Leitz; Jiangang Long; Jiankang Liu; Dapeng Yu; Qing Zhao
Journal:  Sci Rep       Date:  2016-02-11       Impact factor: 4.379

4.  Hydrogen Peroxide Sensing Based on Inner Surfaces Modification of Solid-State Nanopore.

Authors:  Libo Zhu; Dejian Gu; Quanjun Liu
Journal:  Nanoscale Res Lett       Date:  2017-06-20       Impact factor: 4.703

5.  Electro-Osmotic Vortices Promote the Capture of Folded Proteins by PlyAB Nanopores.

Authors:  Gang Huang; Kherim Willems; Mart Bartelds; Pol van Dorpe; Misha Soskine; Giovanni Maglia
Journal:  Nano Lett       Date:  2020-04-13       Impact factor: 11.189

Review 6.  Application of Solid-State Nanopore in Protein Detection.

Authors:  Yuhan Luo; Linlin Wu; Jing Tu; Zuhong Lu
Journal:  Int J Mol Sci       Date:  2020-04-17       Impact factor: 5.923

  6 in total

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