Literature DB >> 25044642

Heavy hitting: Using water to label humans.

Yonggang Ma1, Andriy Yabluchanskiy, Merry L Lindsey.   

Abstract

Monitoring protein dynamics, compared to measuring static protein expression profiles taken with snapshot evaluations, have recently been the focus of proteomics studies examining tissue or blood samples where time course changes occur. Using deuterium oxide ((2) H2 O) to label amino acids is a useful method to monitor protein turnover rates. The synthesis rate for individual proteins is calculated from the rate of (2) H incorporation into specific proteins analyzed by high resolution MS. In this issue, Wang and colleagues measured the plasma protein turnover dynamics in healthy humans by in vivo (2) H2 O labeling [Wang, D. et al., Proteomics Clin. Appl. 2014, 8, 610-619]. The authors developed and validated a safe and accessible (2) H2 O administration protocol to record the turnover dynamics of 542 plasma proteins using MS. Their study demonstrates a promising new way to evaluate plasma protein dynamics in clinical trials where such knowledge could help for prognosis and evaluating treatment efficacy.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Deuterium oxide; MS; Matrix metalloproteinase; Protein

Mesh:

Substances:

Year:  2014        PMID: 25044642      PMCID: PMC4230989          DOI: 10.1002/prca.201400066

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN: 1862-8346            Impact factor:   3.494


  14 in total

1.  Measurement of liver collagen synthesis by heavy water labeling: effects of profibrotic toxicants and antifibrotic interventions.

Authors:  James L Gardner; Scott M Turner; Abraham Bautista; Glen Lindwall; Mohamad Awada; Marc K Hellerstein
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2007-03-08       Impact factor: 4.052

2.  Measuring proteome dynamics in vivo: as easy as adding water?

Authors:  Nadia Rachdaoui; Leanne Austin; Eric Kramer; Michael J Previs; Vernon E Anderson; Takhar Kasumov; Stephen F Previs
Journal:  Mol Cell Proteomics       Date:  2009-09-01       Impact factor: 5.911

Review 3.  Proteome dynamics: revisiting turnover with a global perspective.

Authors:  Amy J Claydon; Robert Beynon
Journal:  Mol Cell Proteomics       Date:  2012-11-02       Impact factor: 5.911

4.  Protein kinetic signatures of the remodeling heart following isoproterenol stimulation.

Authors:  Maggie P Y Lam; Ding Wang; Edward Lau; David A Liem; Allen K Kim; Dominic C M Ng; Xiangbo Liang; Brian J Bleakley; Chenguang Liu; Jason D Tabaraki; Martin Cadeiras; Yibin Wang; Mario C Deng; Peipei Ping
Journal:  J Clin Invest       Date:  2014-03-10       Impact factor: 14.808

5.  Cardiac extracellular proteome profiling and membrane topology analysis using glycoproteomics.

Authors:  Yuan Tian; Tejaswi Koganti; Zhihao Yao; Presley Cannon; Punit Shah; Laura Pietrovito; Alessandra Modesti; Paul Aiyetan; Kristine DeLeon-Pennell; Yonggang Ma; Ganesh V Halade; Chindo Hicks; Hui Zhang; Merry L Lindsey
Journal:  Proteomics Clin Appl       Date:  2014-08       Impact factor: 3.494

6.  Measurement of human plasma proteome dynamics with (2)H(2)O and liquid chromatography tandem mass spectrometry.

Authors:  John C Price; William E Holmes; Kelvin W Li; Nicholas A Floreani; Richard A Neese; Scott M Turner; Marc K Hellerstein
Journal:  Anal Biochem       Date:  2011-09-14       Impact factor: 3.365

7.  Characterization of human plasma proteome dynamics using deuterium oxide.

Authors:  Ding Wang; David A Liem; Edward Lau; Dominic C M Ng; Brian J Bleakley; Martin Cadeiras; Mario C Deng; Maggie P Y Lam; Peipei Ping
Journal:  Proteomics Clin Appl       Date:  2014-08       Impact factor: 3.494

Review 8.  The development of selected reaction monitoring methods for targeted proteomics via empirical refinement.

Authors:  Michael S Bereman; Brendan MacLean; Daniela M Tomazela; Daniel C Liebler; Michael J MacCoss
Journal:  Proteomics       Date:  2012-04       Impact factor: 3.984

9.  A pilot study demonstrating a non-invasive method for the measurement of protein turnover in skin disorders: application to psoriasis.

Authors:  Claire L Emson; Sarah Fitzmaurice; Glen Lindwall; Kelvin W Li; Marc K Hellerstein; Howard I Maibach; Wilson Liao; Scott M Turner
Journal:  Clin Transl Med       Date:  2013-06-17

Review 10.  Myofibroblasts and the extracellular matrix network in post-myocardial infarction cardiac remodeling.

Authors:  Yonggang Ma; Lisandra E de Castro Brás; Hiroe Toba; Rugmani Padmanabhan Iyer; Michael E Hall; Michael D Winniford; Richard A Lange; Suresh C Tyagi; Merry L Lindsey
Journal:  Pflugers Arch       Date:  2014-02-13       Impact factor: 3.657

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