Literature DB >> 25044474

Contribution of each Trp residue toward the intrinsic fluorescence of the Giα1 protein.

Matthew S Najor1, Kenneth W Olsen, Daniel J Graham, Duarte Mota de Freitas.   

Abstract

Giα1 is the inhibitory G-protein that, upon activation, reduces the activity of adenylyl cyclase. Comparison of the crystal structures of Giα1 bound to GDP•AMF or GTPγS with that of the inactive, GPD-bound protein indicates that a conformational change occurs in the activation step centered on three switch regions. The contribution of each tryptophan residue (W211 in the switch II region, W131 in the α-helical domain, and W258 in the GTPase domain) toward the intrinsic protein fluorescence was evaluated by using W211F, W131F, and W258F mutants. All three tryptophan residues contributed significantly toward the emission spectra regardless of the conformation. When activated by either GDP•AMF or GTPγS, the observed maximal-fluorescence scaled according to the solvent accessibilities of the tryptophan residues, calculated from molecular dynamics simulations. In the GDP•AMF and GTPγS, but not in the GDP, conformations, the residues W211 and R208 are in close proximity and form a π-cation interaction that results in a red shift in the emission spectra of WT, and W131F and W258F mutants, but a blue shift for the W211F mutant. The observed shifts did not show a relationship with the span of the W211-R208 bridge, but rather with changes in the total interaction energies. Trypsin digestion of the active conformations only occurred for the W211F mutant indicating that the electrostatic π-cation interaction blocks access to R208, which was consistent with the molecular dynamics simulations. We conclude that solvent accessibility and interaction energies account for the fluorescence features of Giα1 .
© 2014 The Protein Society.

Entities:  

Keywords:  Giα1; arginine; cation-π interactions; electrostatic and Van der Waals interaction energies; fluorescence; molecular dynamics simulations; solvent accessibility; tryptophan

Mesh:

Substances:

Year:  2014        PMID: 25044474      PMCID: PMC4287000          DOI: 10.1002/pro.2523

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  49 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  The [35S]GTPgammaS binding assay: approaches and applications in pharmacology.

Authors:  C Harrison; J R Traynor
Journal:  Life Sci       Date:  2003-12-12       Impact factor: 5.037

3.  The ultraviolet fluorescence of proteins in neutral solution.

Authors:  F W TEALE
Journal:  Biochem J       Date:  1960-08       Impact factor: 3.857

4.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

Authors:  Konstantin Arnold; Lorenza Bordoli; Jürgen Kopp; Torsten Schwede
Journal:  Bioinformatics       Date:  2005-11-13       Impact factor: 6.937

Review 5.  Cation-π interaction: its role and relevance in chemistry, biology, and material science.

Authors:  A Subha Mahadevi; G Narahari Sastry
Journal:  Chem Rev       Date:  2012-11-13       Impact factor: 60.622

Review 6.  Aromatic-aromatic interaction: a mechanism of protein structure stabilization.

Authors:  S K Burley; G A Petsko
Journal:  Science       Date:  1985-07-05       Impact factor: 47.728

7.  Cation-pi interactions in structural biology.

Authors:  J P Gallivan; D A Dougherty
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

8.  Purification and properties of the inhibitory guanine nucleotide-binding regulatory component of adenylate cyclase.

Authors:  G M Bokoch; T Katada; J K Northup; M Ui; A G Gilman
Journal:  J Biol Chem       Date:  1984-03-25       Impact factor: 5.157

9.  Conformational changes in the amino-terminal helix of the G protein alpha(i1) following dissociation from Gbetagamma subunit and activation.

Authors:  Martina Medkova; Anita M Preininger; Nan-Jun Yu; Wayne L Hubbell; Heidi E Hamm
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

10.  Structures of active conformations of Gi alpha 1 and the mechanism of GTP hydrolysis.

Authors:  D E Coleman; A M Berghuis; E Lee; M E Linder; A G Gilman; S R Sprang
Journal:  Science       Date:  1994-09-02       Impact factor: 47.728

View more
  1 in total

1.  Folding of Gα Subunits: Implications for Disease States.

Authors:  Matthew Najor; Brian D Leverson; Jesse L Goossens; Saad Kothawala; Kenneth W Olsen; Duarte Mota de Freitas
Journal:  ACS Omega       Date:  2018-10-01
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.