Literature DB >> 25043658

An affine continuum mechanical model for cross-linked F-actin networks with compliant linker proteins.

Gerhard A Holzapfel1, Michael J Unterberger2, Ray W Ogden3.   

Abstract

Cross-linked actin networks are important building blocks of the cytoskeleton. In order to gain deeper insight into the interpretation of experimental data on actin networks, adequate models are required. In this paper we introduce an affine constitutive network model for cross-linked F-actin networks based on nonlinear continuum mechanics, and specialize it in order to reproduce the experimental behavior of in vitro reconstituted model networks. The model is based on the elastic properties of single filaments embedded in an isotropic matrix such that the overall properties of the composite are described by a free-energy function. In particular, we are able to obtain the experimentally determined shear and normal stress responses of cross-linked actin networks typically observed in rheometer tests. In the present study an extensive analysis is performed by applying the proposed model network to a simple shear deformation. The single filament model is then extended by incorporating the compliance of cross-linker proteins and further extended by including viscoelasticity. All that is needed for the finite element implementation is the constitutive model for the filaments, the linkers and the matrix, and the associated elasticity tensor in either the Lagrangian or Eulerian formulation. The model facilitates parameter studies of experimental setups such as micropipette aspiration experiments and we present such studies to illustrate the efficacy of this modeling approach.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Actin filaments; Actin networks; Continuum mechanics; Cross-linker proteins; Finite element analysis

Mesh:

Substances:

Year:  2014        PMID: 25043658     DOI: 10.1016/j.jmbbm.2014.05.014

Source DB:  PubMed          Journal:  J Mech Behav Biomed Mater        ISSN: 1878-0180


  9 in total

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Authors:  Fei Jia; Martine Ben Amar; Bernard Billoud; Bénédicte Charrier
Journal:  J R Soc Interface       Date:  2017-02       Impact factor: 4.118

8.  Combined experimental and computational characterization of crosslinked collagen-based hydrogels.

Authors:  Clara Valero; Hippolyte Amaveda; Mario Mora; Jose Manuel García-Aznar
Journal:  PLoS One       Date:  2018-04-17       Impact factor: 3.240

9.  A computational model for understanding the micro-mechanics of collagen fiber network in the tunica adventitia.

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  9 in total

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