Literature DB >> 25038065

Colonization state influences the hemocyte proteome in a beneficial squid-Vibrio symbiosis.

Tyler R Schleicher1, Nathan C VerBerkmoes2, Manesh Shah3, Spencer V Nyholm4.   

Abstract

The squid Euprymna scolopes and the luminescent bacterium Vibrio fischeri form a highly specific beneficial light organ symbiosis. Not only does the host have to select V. fischeri from the environment, but it must also prevent subsequent colonization by non-symbiotic microorganisms. Host macrophage-like hemocytes are believed to play a role in mediating the symbiosis with V. fischeri. Previous studies have shown that the colonization state of the light organ influences the host's hemocyte response to the symbiont. To further understand the molecular mechanisms behind this process, we used two quantitative mass-spectrometry-based proteomic techniques, isobaric tags for relative and absolute quantification (iTRAQ) and label-free spectral counting, to compare and quantify the adult hemocyte proteomes from colonized (sym) and uncolonized (antibiotic-treated/cured) squid. Overall, iTRAQ allowed for the quantification of 1,024 proteins with two or more peptides. Thirty-seven unique proteins were determined to be significantly different between sym and cured hemocytes (p value < 0.05), with 20 more abundant proteins and 17 less abundant in sym hemocytes. The label-free approach resulted in 1,241 proteins that were identified in all replicates. Of 185 unique proteins present at significantly different amounts in sym hemocytes (as determined by spectral counting), 92 were more abundant and 93 were less abundant. Comparisons between iTRAQ and spectral counting revealed that 30 of the 37 proteins quantified via iTRAQ exhibited trends similar to those identified by the label-free method. Both proteomic techniques mutually identified 16 proteins that were significantly different between the two groups of hemocytes (p value < 0.05). The presence of V. fischeri in the host light organ influenced the abundance of proteins associated with the cytoskeleton, adhesion, lysosomes, proteolysis, and the innate immune response. These data provide evidence that colonization by V. fischeri alters the hemocyte proteome and reveals proteins that may be important for maintaining host-symbiont specificity.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2014        PMID: 25038065      PMCID: PMC4188995          DOI: 10.1074/mcp.M113.037259

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  74 in total

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3.  The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra.

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Journal:  Mol Cell Proteomics       Date:  2007-05-27       Impact factor: 5.911

Review 4.  The immunological functions of saposins.

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Journal:  Adv Immunol       Date:  2010       Impact factor: 3.543

5.  Quantitative analysis of the naringenin-inducible proteome in Rhizobium leguminosarum by isobaric tagging and mass spectrometry.

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Review 6.  Pulmonary surfactant: an immunological perspective.

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Journal:  Cell Physiol Biochem       Date:  2009-12-22

7.  Proteomic analysis of an unculturable bacterial endosymbiont (Blochmannia) reveals high abundance of chaperonins and biosynthetic enzymes.

Authors:  Yongliang Fan; J Will Thompson; Laura G Dubois; M Arthur Moseley; Jennifer J Wernegreen
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8.  Peptidoglycan induces loss of a nuclear peptidoglycan recognition protein during host tissue development in a beneficial animal-bacterial symbiosis.

Authors:  Joshua V Troll; Dawn M Adin; Andrew M Wier; Nicholas Paquette; Neal Silverman; William E Goldman; Frank J Stadermann; Eric V Stabb; Margaret J McFall-Ngai
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9.  Community proteomics of a natural microbial biofilm.

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10.  An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri.

Authors:  Carlene K Chun; Todd E Scheetz; Maria de Fatima Bonaldo; Bartley Brown; Anik Clemens; Wendy J Crookes-Goodson; Keith Crouch; Tad DeMartini; Mari Eyestone; Michael S Goodson; Bernadette Janssens; Jennifer L Kimbell; Tanya A Koropatnick; Tamara Kucaba; Christina Smith; Jennifer J Stewart; Deyan Tong; Joshua V Troll; Sarahrose Webster; Jane Winhall-Rice; Cory Yap; Thomas L Casavant; Margaret J McFall-Ngai; M Bento Soares
Journal:  BMC Genomics       Date:  2006-06-16       Impact factor: 3.969

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  15 in total

1.  The Glial Cell-Derived Neurotrophic Factor (GDNF)-responsive Phosphoprotein Landscape Identifies Raptor Phosphorylation Required for Spermatogonial Progenitor Cell Proliferation.

Authors:  Min Wang; Yueshuai Guo; Mei Wang; Tao Zhou; Yuanyuan Xue; Guihua Du; Xiang Wei; Jing Wang; Lin Qi; Hao Zhang; Lufan Li; Lan Ye; Xuejiang Guo; Xin Wu
Journal:  Mol Cell Proteomics       Date:  2017-04-13       Impact factor: 5.911

Review 2.  A conserved chemical dialog of mutualism: lessons from squid and vibrio.

Authors:  Julia A Schwartzman; Edward G Ruby
Journal:  Microbes Infect       Date:  2015-09-15       Impact factor: 2.700

Review 3.  Simple animal models for microbiome research.

Authors:  Angela E Douglas
Journal:  Nat Rev Microbiol       Date:  2019-08-15       Impact factor: 60.633

4.  The cytokine MIF controls daily rhythms of symbiont nutrition in an animal-bacterial association.

Authors:  Eric J Koch; Clotilde Bongrand; Brittany D Bennett; Susannah Lawhorn; Silvia Moriano-Gutierrez; Marko Pende; Karim Vadiwala; Hans-Ulrich Dodt; Florian Raible; William Goldman; Edward G Ruby; Margaret McFall-Ngai
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-16       Impact factor: 11.205

5.  Transcriptome analysis of the white body of the squid Euprymna tasmanica with emphasis on immune and hematopoietic gene discovery.

Authors:  Karla A Salazar; Nina R Joffe; Nathalie Dinguirard; Peter Houde; Maria G Castillo
Journal:  PLoS One       Date:  2015-03-16       Impact factor: 3.240

Review 6.  The Role of Hemocytes in the Hawaiian Bobtail Squid, Euprymna scolopes: A Model Organism for Studying Beneficial Host-Microbe Interactions.

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7.  Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome.

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Journal:  MBio       Date:  2017-10-17       Impact factor: 7.867

8.  Differentially expressed proteins underlying childhood cortical dysplasia with epilepsy identified by iTRAQ proteomic profiling.

Authors:  Lu Qin; Xi Liu; Shiyong Liu; Yi Liu; Yixuan Yang; Hui Yang; Yangmei Chen; Lifen Chen
Journal:  PLoS One       Date:  2017-02-21       Impact factor: 3.240

9.  Transcriptomic changes in an animal-bacterial symbiosis under modeled microgravity conditions.

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Journal:  Sci Rep       Date:  2017-04-10       Impact factor: 4.379

10.  Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiont.

Authors:  Ashley N Luck; Kathryn G Anderson; Colleen M McClung; Nathan C VerBerkmoes; Jeremy M Foster; Michelle L Michalski; Barton E Slatko
Journal:  BMC Genomics       Date:  2015-11-11       Impact factor: 3.969

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