Literature DB >> 25035965

Hierarchical Adaptive Means (HAM) clustering for hardware-efficient, unsupervised and real-time spike sorting.

Sivylla E Paraskevopoulou1, Di Wu2, Amir Eftekhar3, Timothy G Constandinou4.   

Abstract

This work presents a novel unsupervised algorithm for real-time adaptive clustering of neural spike data (spike sorting). The proposed Hierarchical Adaptive Means (HAM) clustering method combines centroid-based clustering with hierarchical cluster connectivity to classify incoming spikes using groups of clusters. It is described how the proposed method can adaptively track the incoming spike data without requiring any past history, iteration or training and autonomously determines the number of spike classes. Its performance (classification accuracy) has been tested using multiple datasets (both simulated and recorded) achieving a near-identical accuracy compared to k-means (using 10-iterations and provided with the number of spike classes). Also, its robustness in applying to different feature extraction methods has been demonstrated by achieving classification accuracies above 80% across multiple datasets. Last but crucially, its low complexity, that has been quantified through both memory and computation requirements makes this method hugely attractive for future hardware implementation.
Copyright © 2014 Elsevier B.V. All rights reserved.

Keywords:  Brain machine interface; Clustering; Hardware implementable; Realtime; Spike sorting; Streaming

Mesh:

Year:  2014        PMID: 25035965     DOI: 10.1016/j.jneumeth.2014.07.004

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  2 in total

1.  A real-time spike classification method based on dynamic time warping for extracellular enteric neural recording with large waveform variability.

Authors:  Yingqiu Cao; Nikolai Rakhilin; Philip H Gordon; Xiling Shen; Edwin C Kan
Journal:  J Neurosci Methods       Date:  2015-12-21       Impact factor: 2.390

2.  Spike sorting based on shape, phase, and distribution features, and K-TOPS clustering with validity and error indices.

Authors:  Carmen Rocío Caro-Martín; José M Delgado-García; Agnès Gruart; R Sánchez-Campusano
Journal:  Sci Rep       Date:  2018-12-12       Impact factor: 4.379

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.