Literature DB >> 25035864

Organomatics and organometrics: Novel platforms for long-term whole-organ culture.

Bote G Bruinsma, Martin L Yarmush, Korkut Uygun.   

Abstract

Organ culture systems are instrumental as experimental whole-organ models of physiology and disease, as well as preservation modalities facilitating organ replacement therapies such as transplantation. Nevertheless, a coordinated system of machine perfusion components and integrated regulatory control has yet to be fully developed to achieve long-term maintenance of organ function ex vivo. Here we outline current strategies for organ culture, or organomatics, and how these systems can be regulated by means of computational algorithms, or organometrics, to achieve the organ culture platforms anticipated in modern-day biomedicine.

Entities:  

Year:  2014        PMID: 25035864      PMCID: PMC4097862          DOI: 10.1142/S2339547814300029

Source DB:  PubMed          Journal:  Technology (Singap World Sci)


  161 in total

1.  Detection of ATP by "in line" 31P magnetic resonance spectroscopy during oxygenated hypothermic pulsatile perfusion of pigs' kidneys.

Authors:  Francois Lazeyras; Leo Buhler; Jean-Paul Vallee; Martin Hergt; Antonio Nastasi; Raphael Ruttimann; Philippe Morel; Jean-Bernard Buchs
Journal:  MAGMA       Date:  2012-05-29       Impact factor: 2.310

2.  Normothermic perfusion of ischaemic porcine kidneys: an evaluation of ex vivo function and endothelin receptor antagonism.

Authors:  Christopher D Mann; Matthew S Metcalfe; Michael L Nicholson
Journal:  J Nephrol       Date:  2009 Jan-Feb       Impact factor: 3.902

3.  Normothermic extracorporeal human liver perfusion following donation after cardiac death.

Authors:  Rinaldo Bellomo; Bruno Marino; Graham Starkey; Bhao Zhong Wang; Michael A Fink; Nan Zhu; Satoshi Suzuki; Shane Houston; Glenn Eastwood; Paolo Calzavacca; Neil Glassford; Brenton Chambers; Alison Skene; Antoine G Schneider; Daryl Jones; Andrew Hilton; Helen Opdam; Stephen Warrillow; Nicole Gauthier; Lynne Johnson; Robert Jones
Journal:  Crit Care Resusc       Date:  2013-06       Impact factor: 2.159

4.  Multifactorial biological modulation of warm ischemia reperfusion injury in liver transplantation from non-heart-beating donors eliminates primary nonfunction and reduces bile salt toxicity.

Authors:  Diethard Monbaliu; Katrien Vekemans; Harm Hoekstra; Lauri Vaahtera; Louis Libbrecht; Katelijne Derveaux; Jaakko Parkkinen; Qiang Liu; Veerle Heedfeld; Tine Wylin; Hugo Deckx; Marcel Zeegers; Erika Balligand; Wim Buurman; Jos van Pelt; Robert J Porte; Jacques Pirenne
Journal:  Ann Surg       Date:  2009-11       Impact factor: 12.969

5.  Normothermic ex vivo lung perfusion in clinical lung transplantation.

Authors:  Marcelo Cypel; Jonathan C Yeung; Mingyao Liu; Masaki Anraku; Fengshi Chen; Wojtek Karolak; Masaaki Sato; Jane Laratta; Sassan Azad; Mindy Madonik; Chung-Wai Chow; Cecilia Chaparro; Michael Hutcheon; Lianne G Singer; Arthur S Slutsky; Kazuhiro Yasufuku; Marc de Perrot; Andrew F Pierre; Thomas K Waddell; Shaf Keshavjee
Journal:  N Engl J Med       Date:  2011-04-14       Impact factor: 91.245

6.  Adenine nucleotide liver tissue concentrations from non-heart-beating donor pigs and organ viability after liver transplantation.

Authors:  F X González; J C García-Valdecasas; M A López-Boado; J Tabet; M Net; L Grande; A Cifuentes; R Rull; R Valero; J Beltrán; M Elena; C Cabrer; J Palacin; J Visa
Journal:  Transplant Proc       Date:  1997-12       Impact factor: 1.066

7.  Aristolochic acid I metabolism in the isolated perfused rat kidney.

Authors:  Horacio A Priestap; M Cecilia Torres; Robert A Rieger; Kathleen G Dickman; Tomoko Freshwater; David R Taft; Manuel A Barbieri; Charles R Iden
Journal:  Chem Res Toxicol       Date:  2011-12-14       Impact factor: 3.739

8.  Metabolic preconditioning of donor organs: defatting fatty livers by normothermic perfusion ex vivo.

Authors:  Deepak Nagrath; Hongzhi Xu; Yoko Tanimura; Rongjun Zuo; François Berthiaume; Marco Avila; Rubin Yarmush; Martin L Yarmush
Journal:  Metab Eng       Date:  2009-06-07       Impact factor: 9.783

Review 9.  Living-cell microarrays.

Authors:  Martin L Yarmush; Kevin R King
Journal:  Annu Rev Biomed Eng       Date:  2009       Impact factor: 9.590

10.  Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory.

Authors:  Elias M Puchner; Jessica M Walter; Robert Kasper; Bo Huang; Wendell A Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

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  5 in total

Review 1.  Systems engineering the organ preservation process for transplantation.

Authors:  Reinier J de Vries; Martin Yarmush; Korkut Uygun
Journal:  Curr Opin Biotechnol       Date:  2019-07-04       Impact factor: 9.740

2.  Supercooling preservation and transplantation of the rat liver.

Authors:  Bote G Bruinsma; Tim A Berendsen; Maria-Louisa Izamis; Heidi Yeh; Martin L Yarmush; Korkut Uygun
Journal:  Nat Protoc       Date:  2015-02-18       Impact factor: 13.491

3.  Functional human liver preservation and recovery by means of subnormothermic machine perfusion.

Authors:  Bote G Bruinsma; James H Avruch; Pepijn D Weeder; Gautham V Sridharan; Basak E Uygun; Negin G Karimian; Robert J Porte; James F Markmann; Heidi Yeh; Korkut Uygun
Journal:  J Vis Exp       Date:  2015-04-27       Impact factor: 1.355

4.  Metabolomic Modularity Analysis (MMA) to Quantify Human Liver Perfusion Dynamics.

Authors:  Gautham Vivek Sridharan; Bote Gosse Bruinsma; Shyam Sundhar Bale; Anandh Swaminathan; Nima Saeidi; Martin L Yarmush; Korkut Uygun
Journal:  Metabolites       Date:  2017-11-13

5.  Non-invasive quantification of the mitochondrial redox state in livers during machine perfusion.

Authors:  Reinier J de Vries; Stephanie E J Cronin; Padraic Romfh; Casie A Pendexter; Rohil Jain; Benjamin T Wilks; Siavash Raigani; Thomas M van Gulik; Peili Chen; Heidi Yeh; Korkut Uygun; Shannon N Tessier
Journal:  PLoS One       Date:  2021-10-27       Impact factor: 3.240

  5 in total

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