Literature DB >> 25032508

Positive roles of compartmentalization in internal reactions.

Norikazu Ichihashi1, Tetsuya Yomo2.   

Abstract

Recently, many researchers have attempted to construct artificial cell models using a bottom-up approach in which various biochemical reactions that involve a defined set of molecules are reconstructed in cell-like compartments, such as liposomes and water-in-oil droplets. In many of these studies, the cell-like compartments have acted only as containers for the encapsulated biochemical reactions, whereas other studies have indicated that compartmentalization improves the rates and yields of these reactions. Here, we introduce two ways in which compartmentalization can improve internal reactions: the isolation effect and the condensation effect. These positive effects of compartmentalization might have played an important role in the genesis of the first primitive cell on early Earth.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25032508     DOI: 10.1016/j.cbpa.2014.06.011

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  10 in total

1.  The cellular membrane as a mediator for small molecule interaction with membrane proteins.

Authors:  Christopher G Mayne; Mark J Arcario; Paween Mahinthichaichan; Javier L Baylon; Josh V Vermaas; Latifeh Navidpour; Po-Chao Wen; Sundarapandian Thangapandian; Emad Tajkhorshid
Journal:  Biochim Biophys Acta       Date:  2016-05-06

2.  The Origin(s) of Cell(s): Pre-Darwinian Evolution from FUCAs to LUCA : To Carl Woese (1928-2012), for his Conceptual Breakthrough of Cellular Evolution.

Authors:  Shiping Tang
Journal:  J Mol Evol       Date:  2021-06-25       Impact factor: 2.395

3.  Vesicle encapsulation stabilizes intermolecular association and structure formation of functional RNA and DNA.

Authors:  Huan Peng; Amandine Lelievre; Katharina Landenfeld; Sabine Müller; Irene A Chen
Journal:  Curr Biol       Date:  2021-11-10       Impact factor: 10.834

4.  Emergent chemical behavior in variable-volume protocells.

Authors:  Ben Shirt-Ediss; Ricard V Solé; Kepa Ruiz-Mirazo
Journal:  Life (Basel)       Date:  2015-01-13

5.  Hierarchical Self-Assembly of a Copolymer-Stabilized Coacervate Protocell.

Authors:  Alexander F Mason; Bastiaan C Buddingh'; David S Williams; Jan C M van Hest
Journal:  J Am Chem Soc       Date:  2017-11-17       Impact factor: 15.419

6.  Framing major prebiotic transitions as stages of protocell development: three challenges for origins-of-life research.

Authors:  Ben Shirt-Ediss; Sara Murillo-Sánchez; Kepa Ruiz-Mirazo
Journal:  Beilstein J Org Chem       Date:  2017-07-13       Impact factor: 2.883

Review 7.  Durable vesicles for reconstitution of membrane proteins in biotechnology.

Authors:  Paul A Beales; Sanobar Khan; Stephen P Muench; Lars J C Jeuken
Journal:  Biochem Soc Trans       Date:  2017-02-08       Impact factor: 5.407

8.  Cell Membrane-Based Nanoreactor To Mimic the Bio-Compartmentalization Strategy of a Cell.

Authors:  Vimalkumar Balasubramanian; Andrea Poillucci; Alexandra Correia; Hongbo Zhang; Christian Celia; Hélder A Santos
Journal:  ACS Biomater Sci Eng       Date:  2018-02-15

Review 9.  Constructive Approaches for Understanding the Origin of Self-Replication and Evolution.

Authors:  Norikazu Ichihashi; Tetsuya Yomo
Journal:  Life (Basel)       Date:  2016-07-13

10.  Lipid vesicles chaperone an encapsulated RNA aptamer.

Authors:  Ranajay Saha; Samuel Verbanic; Irene A Chen
Journal:  Nat Commun       Date:  2018-06-13       Impact factor: 14.919

  10 in total

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