Literature DB >> 25030111

Sequence-specific backbone (1)H, (13)C, and (15)N resonance assignments of human ribonuclease 4.

Donald Gagné1, Nicolas Doucet.   

Abstract

Human ribonuclease 4 (RNase 4) is the most evolutionarily conserved member of the 8 canonical human pancreatic-like RNases, showing more than 90% identity with bovine and porcine homologues. The enzyme displays ribonucleolytic activity with a strong preference for uracil-containing RNA substrates, a feature only shared with human eosinophil derived-neurotoxin (EDN, or RNase 2) and eosinophil cationic protein (ECP, or RNase 3). It is also the shortest member of the human family, with a significantly truncated C-terminal tail. Its unique active-site pocket and high degree of conservation among vertebrates suggest that the enzyme plays a crucial biological function. Here, we report on the (1)H, (13)C and (15)N backbone resonance assignments of RNase 4, providing means to characterize its molecular function at the atomic level by NMR.

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Year:  2014        PMID: 25030111      PMCID: PMC4764873          DOI: 10.1007/s12104-014-9570-2

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  28 in total

1.  RNase 8, a novel RNase A superfamily ribonuclease expressed uniquely in placenta.

Authors:  Jianzhi Zhang; Kimberly D Dyer; Helene F Rosenberg
Journal:  Nucleic Acids Res       Date:  2002-03-01       Impact factor: 16.971

2.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

3.  Purification and characterization of three ribonucleases from human kidney: comparison with urine ribonucleases.

Authors:  K Mizuta; S Awazu; T Yasuda; K Kishi
Journal:  Arch Biochem Biophys       Date:  1990-08-15       Impact factor: 4.013

4.  Ribonucleases from rat and bovine liver: purification, specificity and structural characterization.

Authors:  W Zhao; Z Kote-Jarai; Y van Santen; J Hofsteenge; J J Beintema
Journal:  Biochim Biophys Acta       Date:  1998-04-23

Review 5.  The eight human "canonical" ribonucleases: molecular diversity, catalytic properties, and special biological actions of the enzyme proteins.

Authors:  Salvatore Sorrentino
Journal:  FEBS Lett       Date:  2010-04-11       Impact factor: 4.124

6.  The isolation, purification, and properties of a ribonuclease (Mr 18 000) from human uremic serum, and its relation to the human urinary ribonuclease (Mr 33 000). II. Properties of the enzymes.

Authors:  E Z Rabin; B Tattrie
Journal:  Biochim Biophys Acta       Date:  1982-02-04

7.  In vitro biological activity of bovine milk ribonuclease-4.

Authors:  R Di Liddo; D Dalzoppo; S Baiguera; M T Conconi; M Dettin; P P Parnigotto; C Grandi
Journal:  Mol Med Rep       Date:  2010 Jan-Feb       Impact factor: 2.952

8.  Amino acid sequence of human tumor derived angiogenin.

Authors:  D J Strydom; J W Fett; R R Lobb; E M Alderman; J L Bethune; J F Riordan; B L Vallee
Journal:  Biochemistry       Date:  1985-09-24       Impact factor: 3.162

9.  The flexibility of a distant loop modulates active site motion and product release in ribonuclease A.

Authors:  Nicolas Doucet; Eric D Watt; J Patrick Loria
Journal:  Biochemistry       Date:  2009-08-04       Impact factor: 3.162

10.  Conservation of flexible residue clusters among structural and functional enzyme homologues.

Authors:  Donald Gagné; Laurie-Anne Charest; Sébastien Morin; Evgenii L Kovrigin; Nicolas Doucet
Journal:  J Biol Chem       Date:  2012-11-07       Impact factor: 5.157

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  2 in total

1.  Sequence-specific backbone resonance assignments and microsecond timescale molecular dynamics simulation of human eosinophil-derived neurotoxin.

Authors:  Donald Gagné; Chitra Narayanan; Khushboo Bafna; Laurie-Anne Charest; Pratul K Agarwal; Nicolas Doucet
Journal:  Biomol NMR Assign       Date:  2017-03-07       Impact factor: 0.746

2.  Conservation of Dynamics Associated with Biological Function in an Enzyme Superfamily.

Authors:  Chitra Narayanan; David N Bernard; Khushboo Bafna; Donald Gagné; Chakra S Chennubhotla; Nicolas Doucet; Pratul K Agarwal
Journal:  Structure       Date:  2018-02-22       Impact factor: 5.006

  2 in total

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