Accumulation of humic-like fluorescent dissolved organic matter in the Japan Sea.

Major fraction of marine dissolved organic matter (DOM) is biologically recalcitrant, however, the accumulation mechanism of recalcitrant DOM has not been fully understood. Here, we examine the distributions of humic-like fluorescent DOM, factions of recalcitrant DOM, and the level of apparent oxygen utilization in the Japan Sea. We find linear relationships between these parameters for the deep water (>200 m) of the Japan Sea, suggesting that fluorescent DOM is produced in situ in the Japan Sea. Furthermore, we find that the amount of fluorescent DOM at a given apparent oxygen utilization is greater in the deep water of the Japan Sea than it is in the North Pacific, where the highest level of fluorescent DOM in the open ocean was previously observed. We conclude that the repeated renewal of the deep water contributes to the accumulation of fluorescent DOM in the interior of the Japan Sea.

At 662 Pg C, oceanic dissolved organic matter (DOM) is a huge pool of reduced carbon, holding greater than 200 times the carbon inventory of marine biomass1. The majority of oceanic DOM is considered to be of marine origin, and the microbial production of DOM (defined as the microbial carbon pump) has been implicated as one of the processes that produce recalcitrant DOM23. Thus, it can be hypothesized that microbially derived, recalcitrant DOM accumulates in oceans. It has been hypothesized that oceanic DOM pool has been historically dynamic and that the changes in its size and the associated sequestration of CO2 (at least 1600 PgC) or release of CO2 from its degradation have affected the state of paleoclimates4. However, because the annual to decadal variation in the amount of recalcitrant DOM in oceans may be too small to detect, we do not know whether the present oceanic DOM pool is stable or dynamic5.

Though dissolved organic carbon (DOC) analyses can detect relatively small differences in DOM quantity due to recent improvements in analytical capabilites16, DOC concentrations alone do not provide insights into the composition of DOM, which is useful for evaluating DOM dynamics6789. One of the more sensitive analytical methods for detecting DOM composition is the fluorescence technique101112. Though this technique can only evaluate fluorescent fractions in DOM, two major types of fluorophores, i.e., protein-like fluorophores (FDOMA) and humic-like fluorophores (FDOMH), can be detected using excitation-emission matrix (EEM) fluorescence1011121314. It is well documented that a major source of FDOMH in coastal environments is the riverine inputs of terrestrial FDOMH11. Conversely, FDOMH can also be produced during the microbial degradation of organic matter151617. Although FDOMH is known to be easily degraded by sunlight181920, linear relationships between the fluorescence intensity of FDOMH and indicators of microbial remineralization, namely, the apparent oxygen utilization (AOU), have been observed throughout deep oceans globally72122232425. In addition, the linear relationships between the amounts of FDOMH and AOU present in the bathypelagic layer throughout the Pacific indicate that in situ-produced FDOMH is bio-recalcitrant over the time scale of global thermohaline circulation (at least 900 years)7. These experimental and observational results suggest that FDOMH is a product of the microbial carbon pump and is thus a useful indicator for evaluating DOM dynamics, especially its recalcitrant fraction.

The Japan Sea is a marginal sea in the western North Pacific that is connected to the East China Sea, the western North Pacific, and the Okhotsk Sea, and it has sills that are shallower than 150 m (Fig. 1). The Japan Sea spans from subarctic to subtropical conditions and is affected by global oceanic processes, e.g., subduction and deep-water formation. There is a relatively uniform water mass at the depths below thermocline that is named the Japan Sea Proper Water (JSPW)262728. The JSPW is known to contain high levels of oxygen and 14C of total dissolved inorganic carbon compared with other locations in the North Pacific and even the South Pacific, which is an indication of active deep convection2829303132. Due to its semi-closed characteristics, the turnover time of the JSPW by convection and the residence time of the water within the Japan Sea have been considered separately and are estimated to be 100 and 1000 years, respectively29. The dissolved oxygen concentrations in the bottom layer of the JSPW have decreased during recent decades, indicating a weakening of the deep convection systems31.

Figure 1

Map of locations sampled for the survey of the FDOMH distribution in the Japan Basin (JB1-2) and the Yamato Basin (YB1-3) of the Japan Sea and the western North Pacific (NP1-5).

Map was created using Ocean Data View.

Though only a few studies have clarified the distributional patterns of DOM in the Japan Sea, it was reported that DOC concentrations in the JSPW were higher than those in deep waters of the North Pacific33. Such high levels of DOC are possibly due to transport of semi-labile DOC from surface layers1 along with the JSPW formation. On the other hand, similar levels of FDOMH between the JSPW and the deep waters of the North Pacific were also reported34. DOM in the deep waters of the North Pacific can be characterized as lowest DOC concentration15 and highest levels of recalcitrant FDOMH724 in the global deep ocean, indicative of the oldest DOM in the global ocean. Thus, there should be some specific mechanisms for keeping high levels of FDOMH in the JSPW that age are significantly younger than the deep waters of the North Pacific32.

To obtain new insights into DOM dynamics in the JSPW as well as in the global ocean, we determined the spatial distributions of FDOMH in the JSPW and in the deep waters of the western North Pacific (Fig. 1), two areas in which the levels of AOU differ significantly (Fig. 2). Water samples were collected from five sites in the Japan Sea (two in the Japan Basin and the others in the Yamato Basin) and five sites in the western North Pacific (Fig. 1). To evaluate the FDOMH composition, filtered seawater samples were analyzed using EEM fluorescence and parallel factor analysis (PARAFAC)1435.

Figure 2

Vertical profiles of AOU, FDOMH-1, and FDOMH-2 in the Japan Sea (upper panels) and the western North Pacific (lower panels).

Results

FDOMH in the Japan Sea

A three-component model was validated based on the PARAFAC modeling of EEMs from the Japan Sea and the western North Pacific (Fig. 3). Components 1 (FDOMH-1) and 2 (FDOMH-2) exhibited fluorescence peaks in the region of humic-like fluorophores1011121314. Component 3 (C3) had a peak with an excitation wavelength less than 300 nm and an emission wavelength less than 350 nm and was characterized as representing protein-like fluorophores1011121314. Because we found a contamination peak that was similar to that of the protein-like fluorophores, C3 was considered to include the edge of the contamination peak and was thus not included in further analyses.

Figure 3

Excitation emission matrix (upper panels) and validation (middle panels) of the three-component model by PARAFAC, and previously published similar PARAFAC components (lower panels).

The grey lines in validation plots represent the results from the split half validation analysis. A black solid line, black broken line, grey solid line, and grey broken line in previously published PARAFAC components is from Ref. (23), Ref. (36), Ref. (24), and Ref. (37), respectively.

FDOMH-1 had a peak at the 470-nm emission wavelength and could be categorized as a humic-like fluorophore that is traditionally defined as terrestrial1011. In contrast, FDOMH-2 could be assigned as a humic-like fluorophore that is traditionally defined as marine because this FDOMH had a peak at the 395-nm emission wavelength1011. Similar PARAFAC components to FDOMH-1 and FDOMH-2 have been reported in previous EEM-PARAFAC studies that examined the open ocean23243637 (Fig. 3).

The vertical profiles of FDOMH-1 and FDOMH-2 were similar to each other in the Japan Sea, and this similarity was observed regardless of the sampling site examined (Fig. 2). The levels of FDOMH were the lowest in surface waters, gradually increased with depth, and were relatively constant at depths greater than 2000 m (Fig. 2). Though EEM-PARAFAC was firstly applied for the JSPW in the present study, similar vertical distributions of FDOMH were previously observed in the Japan Sea by measuring the fluorescence intensities at a single pair of excitation (320 nm) and emission (420 nm) wavelengths3438 and by using EEM33. In the western North Pacific, the amounts of FDOMH-1 and FDOMH-2 were also lowest in the surface waters, followed by an increase with depth that peaked at 1000–1500 m and then decreased slightly with depth (Fig. 2). The vertical distribution of FDOMH in the western North Pacific was similar to those previously observed in the North Pacific723. Though the highest levels of FDOMH previously observed in the open ocean globally were recorded for the intermediate water of the North Pacific724, the amount of FDOMH-1 and FDOMH-2 measured in the JSPW was similar or slightly higher than that recorded in the intermediate water of the western North Pacific (Fig. 2). The vertical profiles of both FDOMH were similar with those of AOU for the Japan Sea and the western North Pacific (Fig. 2).

Relationships between FDOMH and AOU

The JSPW was divided into upper and deeper waters at 1000 m based on the vertical structure of potential temperature2627. Furthermore, the deeper JSPW can also be divided into two water masses at a depth of about 2000–2500 m262832. According to these criteria, the deep water masses in the Japan Sea were divided and defined as follows: the upper JSPW (UJSPW, 200–1000 m), the Japan Sea Deep Water (JSDW, 1000–2000 m), and the Japan Sea Bottom Water (JSBW, 2000 m-bottom). The deep water masses of the western North Pacific were separated into intermediate water (200–1000 m) and North Pacific Deep Water (NPDW, 1000 m-bottom) according to Refs. (7, 23). Except in the JSBW which contained a very narrow range of AOU and FDOMH values (Fig. 2), the FDOMH-1 and FDOMH-2 values were linearly correlated with the amount of AOU for the individual water masses of the Japan Sea and the western North Pacific at depths below 200 m, where the photobleaching of FDOMH can be negligible (Fig. 4; Table 1). The relationships between FDOMH and AOU differed between the Japan Sea and the western North Pacific. Notably, the amount of FDOMH at a given level of AOU was considerably greater for the Japan Sea compared with the western North Pacific.

Figure 4

FDOMH-1 and FDOMH-2 versus AOU in individual water masses of the ocean interior.

Table 1

Relationships between FDOMH and AOU

	FDOMH-1 vs AOU				FDOMH-2 vs AOU
	slope	intercept	R2	n	slope	intercept	R2	n
UJSPW	7.9 × 10−5	0.0071	0.92	23	5.3 × 10−5	0.0089	0.89	23
JSDW	44 × 10−5	−0.047	0.73	25	28 × 10−5	−0.026	0.55	25
JSBW		p > 0.05		24		p > 0.05		24
IW of NP	2.9 × 10−5	0.0091	0.87	13	1.3 × 10−5	0.011	0.62	13
NPDW	3.9 × 10−5	0.007	0.88	32	2.7 × 10−5	0.0066	0.85	32

The water masses are defined as follows: UJSPW = upper Japan Sea Proper Water (200–1000 m of the Japan Sea), JSDW = Japan Sea Deep Water (1000–2000 m of the Japan Sea), JSBW = Japan Sea Bottom Water (2000 m-bottom of the Japan Sea), IW of NP = intermediate water (200–1000 m) of the western North Pacific, and NPDW = North Pacific Deep Water (1000 m–bottom of the western North Pacific).

Discussion

Similar to other oceans72122232425, we find linear relationships between AOU and FDOMH for the deep water (>200 m) of the Japan Sea (Fig. 4; Table 1), indicating that both the FDOMH-1 (traditionally defined as terrestrial humic-like DOM) and the FDOMH-2 (traditionally defined as marine humic-like DOM) are produced in situ in the JSPW as organic matter is oxidized biologically. This result is similar to previous findings obtained for the open ocean2324. Interestingly, the relationships between FDOMH and AOU differed between the Japan Sea and the western North Pacific, namely, the levels of FDOMH-1 and FDOMH-2 at a given AOU are greater for the Japan Sea compared with the western North Pacific. A possible cause for this difference in the FDOMH-AOU relationships is a difference in the production mechanism of FDOMH in the ocean interior, i.e., a difference in the ratio of FDOMH production to oxygen consumption. However, a single linear regression between FDOMH and AOU could be fit to the data for the bathypelagic layer throughout the Pacific7. In addition, one general linear regression fit the relationship between the amount of the fluorescent DOM components (corresponding to FDOMH-1 and FDOMH-2) and the level of AOU for the global deep ocean24. These previous findings imply that the characteristics of the production mechanism of FDOMH are very similar, regardless of differences in oceanic regions. On the other hand, recent long-term (>1year) experiments revealed that production of FDOMH depends on the lability of the substrate; the larger the production of FDOMH relative to oxygen consumption was found for the less labile substrate15. The chemical composition of sinking particles suggests that sinking particles at the deep layer is less labile compared with those at the intermediate layer39, thus, differences in FDOMH production against lability of sinking particles might be reason of differences in FDOMH-AOU relationships among the UJSPW, JSDW, and JSBW (Fig. 4). Therefore, the difference between the FDOMH-AOU relationships of the Japan Sea and the western North Pacific is possibly attributed to other factors and not to a difference in the production mechanism of FDOMH, even though the difference found among the JSPW might be due to different lability of sinking particles.

Although a general FODMH-AOU linear relationship has been observed for the global ocean, the levels of FDOMH found in the North Atlantic Deep Water (NADW) were relatively high compared with those expected based on the FDOMH-AOU relationship for the global ocean24. These deviations for the NADW have been attributed to the contribution of terrestrial FDOMH derived from the Arctic Ocean because relatively high concentrations of lignin phenols, a unique terrestrial biomarker, were observed in the NADW40. In the case of the Japan Sea, the Tsushima Warmer Current, which carries freshwater from the East China Sea, affects the surface water chemistry41. Terrestrial DOM derived from the Yangtze River, in particular, has been known to distribute into the East China Sea4243. In addition, freshwater from the Amur River has been known to flow into the northern part of the Japan Sea44. Thus, in addition to in situ-produced FDOMH, terrestrial DOM derived from the East China Sea and/or the Amur River might contribute to the surface water FDOMH of the Japan Sea and thus to the JSPW.

In coastal environments, the shift of the peak position of FDOMH to a shorter wavelength (blueshift) with an increase in salinity has been well documented101145. Such changes in emission maxima have been considered a result of the shift in the major fluorescent component from a terrestrial (corresponding to FDOMH-1) to a marine origin (corresponding to FDOMH-2)4546. In other words, though both FDOMH-1 and FDOMH-2 are produced at oceanic as well as terrestrial environments, oceanic and terrestrial FDOM is rich in FDOMH-2 and FDOMH-1, respectively. In case of the JSPW, a higher contribution of terrestrial FDOMH would change the composition of the FDOMH by increasing the ratio of FDOMH-1 to FDOMH-2. However, the ratio of FDOMH-1 to FDOMH-2 in the JSPW was similar to or even lower than that in the intermediate and deep waters of the western North Pacific (Fig. 5), suggesting that the contribution of terrestrial FDOMH to the bulk FDOMH signature in the JSPW is similar to or smaller than that in the western North Pacific. The ratio of FDOMH-1 to FDOMH-2 tended to increase with depth (Fig. 5). A blueshift associated with photobleaching has been observed for both coastal and oceanic FDOMH1819, suggesting that the FDOMH in shallower water masses is more photobleached compared with that found in deeper water masses and that the contribution of photobleached FDOMH in the JSPW is potentially greater than that in the western North Pacific. Although the vertical patterns of FDOMH composition cannot refute the possibility of the contribution of photobleached terrestrial FDOMH to the JSPW, the FDOMH-AOU linear relationship (Fig. 4) and conservative behavior of terrestrial chromophoric DOM including FDOMH in the Yangtze River estuary4247 as well as the East China Sea43 indicate that the contribution of photobleached terrestrial FDOMH is minor in the JSPW. The ratios measured in surface waters of the Japan Sea and the western North Pacific had large variations, suggesting that the contributions of terrestrial FDOMH and/or autochthonously produced FDOMH (and the corresponding organisms, including the marine phytoplankton16) in surface waters are different from those of the deep ocean.

Figure 5

The ratio of FDOMH-1 to FDOMH-2 for individual water masses.

The boxes indicate the interquartile range (25th to 75th percentiles) and include the median value (midline); the whiskers indicate the 10th and 90th percentiles, and the symbols indicate the outliers. Surface of JS and surface of NP means surface waters (<200 m) of the Japan Sea and of the western North Pacific, respectively.

Based on our findings and discussion above, the difference in the FDOMH-AOU relationships between the Japan Sea and the western North Pacific is potentially due to the process rather than the in situ production mechanism or the contribution of terrestrial FDOMH. The JSPW is formed in the Japan Sea and has an independent convection system. During the deep convection process (the formation of the JSPW), original JSPW, which is characterized by high levels of AOU and FDOMH compared with surface waters, is transported to the surface layer; then, the level of the AOU decreases because of the mixing of JSPW with surface water and the supply of oxygen from the atmosphere. At the same time, the level of FDOMH also decreases with mixing but is not extensively degraded by photobleaching because of the low winter insolation and the short residence time in the surface layer. It should be emphasized that the turnover time of the JSPW by convection is approximately 100 years, but its residence time within the Japan Sea is approximately 1000 years29, indicating that most of the water that is upwelled by deep convection returns to the deep layer within a relatively short time scale and does not flow out of the Japan Sea into the North Pacific or the Okhotsk Sea. Hence, the water mass, which is characterized by a relatively low AOU and a relatively high FDOMH, is subsequently redistributed as “new” JSPW. Thus, the in situ production of FDOMH in the JSPW and the repeated renewal of the JSPW result in the accumulation of FDOMH in the deep layer of the Japan Sea.

Although the amount of carbon in FDOMH has not been clearly determined, FDOMH may contribute to the high levels of DOC in the JSPW33. The present study elucidates a potential mechanism for the accumulation of FDOMH in the deep ocean. Because FDOMH is bio-recalcitrant on a time scale similar to that of thermohaline circulation7 and the FDOMH pool in the open ocean is basically balanced by the rates of in situ production and photobleaching (and possibly contributions of terrestrial FDOMH), the results of the present study indicate that FDOMH can accumulate in the ocean interior if this balance is upset by changes in processes such as the thermohaline circulation.

Methods

Samples from the Japan Sea were collected at 2 stations (JB1, JB2) in the Japan Basin and 3 stations (YB1, YB2, YB3) in the Yamato Basin from November 5 to 9, 2007, as part of the T/S Oshoro-maru cruise (C184). Water samples from the western North Pacific were collected at 5 stations from July 30 to August 3, 2011 as part of the R/V Tansei Maru cruise (KT-11-17). Salinity and temperature were measured using a CTD, and dissolved oxygen concentrations were measured using an oxygen sensor (SBE 43) connected to a CTD. Seawater samples for fluorescence analyses were collected with Niskin bottles. An in-line filter that was attached directly to the spigot of a Niskin bottle was used for filtration, and the seawater was gravity filtered. Acid-washed 0.22-μm filters (Millipak 100 cartridge, Millipore) and pre-combusted glass fiber filters (GF/F, Whatman) were used to filter the Japan Sea and the western North Pacific samples, respectively. Thus, FDOMH levels in the Japan Sea may be slightly underestimated compared with those in the western North Pacific. Filtered samples were poured into 10-ml acrylic tubes and 20-ml pre-combusted glass ampoules for the Japan Sea and the western North Pacific, respectively, and were then stored frozen in the dark until analysis. The samples of the Japan Sea were collected in duplicate. The detailed results of the bulk fluorescence intensity at a 320-nm excitation and 420-nm emission, the dissolved and total dissolvable Fe concentrations, and the hydrographic parameters for the 5 stations in the Japan Sea have been reported previously38.

Excitation-emission matrix (EEM) fluorescence spectra were obtained using a Horiba Fluoromax-4 fluorometer according to Ref. (48). Samples were thawed and allowed to stand until reaching near room temperature before the EEM measurement. Any residual particles were not observed when samples were thawed to room temperature. Forty-one emission scans from 290 to 550 nm taken at 2-nm intervals were acquired for the excitation wavelengths between 250 and 450 nm at 5-nm intervals. The bandpass was set to 5 nm for both excitation and emission. The fluorescence spectra were scanned with a 0.25-s integration time and acquired in the S/R mode. Several post-acquisition steps were involved in the correction of the fluorescence spectra, including instrumental bias correction and the subtraction of the EEM of Milli-Q water, and the fluorescence units were converted to Raman Units (RU)49. The PARAFAC modeling was conducted in MATLAB (Mathworks, Natick, MA) using the DOMFluor toolbox35. Contamination from protein-like fluorophores, possibly derived from the acrylic tubes, was evident for samples from the Japan Sea. Thus, the ranges of 250–450 nm and 350–520 nm for excitation and emission, respectively (excluding the wavelength range of the protein-like fluorophore contamination), were used for the PARAFAC modeling. The validation of the PARAFAC model was conducted according to Ref. (35). The spectra of two PARAFAC components, i.e., FDOMH-1 and FDOMH-2, were compared with those reported in earlier studies through online repository of published PARAFAC components50 (Fig. 3). The similarity of components was statistically identified as having Tucker congruence exceeding 0.95. As a result, FDOMH-1 was similar to C1 of Ref. (23), C4 of Ref. (36), and C2 of Ref. (37), and FDOMH-2 was similar to C4 of Ref. (24) and C6 of Ref. (36). The average of FDOMH-1 and FDOMH-2 was reported for duplicate sample of the Japan Sea. The difference in fluorescence intensity was 0.0008 ± 0.0007 (n = 112) and 0.0010 ± 0.0008 (n = 112) for FDOMH-1 and FDOMH-2, respectively.

To evaluate any possible effect of contamination, FDOMH-1 and FDOMH-2, seawater samples were collected from the JSBW (2300–2730 m) at two stations during the T/S Oshoro-maru cruise (C253) conducted in April 2013. Seawater samples were collected using Niskin bottles and poured directly into pre-combusted glass vials with teflon-lined caps after triple rinsing to remove any possible contamination from tubes and filters. These samples were stored frozen in the dark until fluorescence analyses. The EEMs of these samples did not show any contamination peaks in the region of the protein-like fluorophores. The fluorescence intensities of FDOMH-1 and FDOMH-2, and FDOMH-1/FDOMH-2 ranged from 0.0236–0.0241, 0.0192–0.0197, and 1.22–1.24 (n = 10), respectively. These values are within the same range observed for the JSBW at other stations (0.0215–0.0243, 0.0175–0.0207, and 1.14–1.24 for FDOMH-1, FDOMH-2, and FDOMH-1/FDOMH-2, respectively; Figs. 2 and 5), indicating that any contamination that possibly derived from the acrylic tubes did not affect the FDOMH results.

Author Contributions

Y.Y. contributed to the project planning, with discussion with K.K.; K.K. and K.H. planned the cruises and performed the sampling; K.T. and Y.Y. measured the samples, analyzed the data, and wrote the first draft of the manuscript; all authors contributed to the preparation of the final draft of the manuscript.