Literature DB >> 25027447

Nitratireductor shengliensis sp. nov., isolated from an oil-polluted saline soil.

Xin-Chi Pan1, Shuang Geng, Ran Mei, Ya-Nan Wang, Hua Cai, Xue-Ying Liu, Yue-Qin Tang, Yong Nie, Si-Yuan Ye, Xiao-Lei Wu.   

Abstract

Two Gram-negative, non-motile, short-rod-shaped bacterial isolates, designated 110399(T) and 110248, were isolated from an oil-polluted saline soil in Shengli Oilfield, Eastern China. The two strains shared 99.9 % 16S rRNA gene sequence similarity with the DNA-DNA relatedness value being 80.0 %. They were both capable to grow at 20-40 °C, pH 7-9, and 1-9 % (w/v) NaCl with the optimum growth happened at 30 °C, pH 8, and 2-6 % (w/v) NaCl. The phylogenetic analysis based on 16S rRNA gene sequences revealed that the two strains were members of Nitratireductor and most closely related to Nitratireductor pacificus pht-3B(T) and N. basaltis J3(T) with the 16S rRNA gene sequence similarities being 97.1 and 97.0 %. The DNA-DNA relatedness between the novel strains and two type strains were below 27 ± 7 %. The strains 110399(T) and 110248 also differed from N. pacificus and N. basaltis in nitrate reduction, salt tolerance, enzyme activities, and utilization of carbon sources. The major cellular fatty acids of strain 110399(T) were C19:0ω8c cyclo (10.5 %) and Summed Feature 8 (C18:1ω7c and/or C18:1ω6c, 41.5 %) which are typical in the genus Nitratireductor. The predominant ubiquinone was Q-10. The genome DNA G+C content of strain 110399(T) and 110248 was 61.1 and 61.7 mol%. On the basis of genetic, phenotypic, and chemotaxonomic analyses, strains 110399(T) and 110248 represent a novel species within the genus Nitratireductor, for which the name Nitratireductor shengliensis sp. nov. is proposed. The type strain is 110399(T) (=CGMCC 1.12519(T) = LMG 27405(T)).

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25027447     DOI: 10.1007/s00284-014-0624-6

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  19 in total

1.  The linear PCR reaction: a simple and robust method for sequencing amplified rRNA genes.

Authors:  T M Embley
Journal:  Lett Appl Microbiol       Date:  1991-09       Impact factor: 2.858

2.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

3.  Nitratireductor pacificus sp. nov., isolated from a pyrene-degrading consortium.

Authors:  Qiliang Lai; Zhiwei Yu; Jianning Wang; Huanzi Zhong; Fengqin Sun; Liping Wang; Baojiang Wang; Zongze Shao
Journal:  Int J Syst Evol Microbiol       Date:  2010-07-09       Impact factor: 2.747

4.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

7.  Degradation of petroleum hydrocarbons (C6-C40) and crude oil by a novel Dietzia strain.

Authors:  Xing-Biao Wang; Chang-Qiao Chi; Yong Nie; Yue-Qin Tang; Yan Tan; Gang Wu; Xiao-Lei Wu
Journal:  Bioresour Technol       Date:  2011-06-12       Impact factor: 9.642

8.  Reappraisal of the antimicrobial susceptibilities of Chryseobacterium and Flavobacterium species and methods for reliable susceptibility testing.

Authors:  S L Fraser; J H Jorgensen
Journal:  Antimicrob Agents Chemother       Date:  1997-12       Impact factor: 5.191

9.  Nitratireductor basaltis sp. nov., isolated from black beach sand.

Authors:  Kyoung-Ho Kim; Seong Woon Roh; Ho-Won Chang; Young-Do Nam; Jung-Hoon Yoon; Che Ok Jeon; Hee-Mock Oh; Jin-Woo Bae
Journal:  Int J Syst Evol Microbiol       Date:  2009-01       Impact factor: 2.747

10.  Nitratireductor aquibiodomus gen. nov., sp. nov., a novel alpha-proteobacterium from the marine denitrification system of the Montreal Biodome (Canada).

Authors:  Normand Labbé; Serge Parent; Richard Villemur
Journal:  Int J Syst Evol Microbiol       Date:  2004-01       Impact factor: 2.747

View more
  1 in total

1.  Functional Genetic Diversity and Culturability of Petroleum-Degrading Bacteria Isolated From Oil-Contaminated Soils.

Authors:  Ji-Quan Sun; Lian Xu; Xue-Ying Liu; Gui-Fang Zhao; Hua Cai; Yong Nie; Xiao-Lei Wu
Journal:  Front Microbiol       Date:  2018-06-20       Impact factor: 5.640

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.