Literature DB >> 25026536

Advances in targeting nucleocapsid-nucleic acid interactions in HIV-1 therapy.

Divita Garg1, Bruce E Torbett2.   

Abstract

The continuing challenge of HIV-1 treatment resistance in patients creates a need for the development of new antiretroviral inhibitors. The HIV nucleocapsid (NC) protein is a potential therapeutic target. NC is necessary for viral RNA packaging and in the early stages of viral infection. The high level of NC amino acid conservation among all HIV-1 clades suggests a low tolerance for mutations. Thus, NC mutations that could arise during inhibitor treatment to provide resistance may render the virus less fit. Disruption of NC function provides a unique opportunity to strongly dampen replication at multiple points during the viral life cycle with a single inhibitor. Although NC exhibits desirable features for a potential antiviral target, the structural flexibility, size, and the presence of two zinc fingers makes small molecule targeting of NC a challenging task. In this review, we discuss the recent advances in strategies to develop inhibitors of NC function and present a perspective on potential novel approaches that may help to overcome some of the current challenges in the field.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  HIV-1; Inhibitors; Nucleocapsid protein; RNA

Mesh:

Substances:

Year:  2014        PMID: 25026536      PMCID: PMC4252855          DOI: 10.1016/j.virusres.2014.07.004

Source DB:  PubMed          Journal:  Virus Res        ISSN: 0168-1702            Impact factor:   3.303


  72 in total

1.  A mimic of HIV-1 nucleocapsid protein impairs reverse transcription and displays antiviral activity.

Authors:  S Druillennec; C Z Dong; S Escaich; N Gresh; A Bousseau; B P Roques; M C Fournié-Zaluski
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  Counting the zinc-proteins encoded in the human genome.

Authors:  Claudia Andreini; Lucia Banci; Ivano Bertini; Antonio Rosato
Journal:  J Proteome Res       Date:  2006-01       Impact factor: 4.466

3.  Selection and characterization of peptides specifically binding to HIV-1 psi (psi) RNA.

Authors:  Mi Young Park; Jiyeon Kwon; Sangyoon Lee; Jichang You; Heejoon Myung
Journal:  Virus Res       Date:  2004-11       Impact factor: 3.303

4.  Optimization of unique, uncharged thioesters as inhibitors of HIV replication.

Authors:  Pratibha Srivastava; Marco Schito; Rasem J Fattah; Toshiaki Hara; Tracy Hartman; Robert W Buckheit; Jim A Turpin; John K Inman; Ettore Appella
Journal:  Bioorg Med Chem       Date:  2004-12-15       Impact factor: 3.641

5.  Inhibition of HIV-1 by a peptide ligand of the genomic RNA packaging signal Psi.

Authors:  Julia Dietz; Joachim Koch; Ajit Kaur; Chinnappan Raja; Stefan Stein; Manuel Grez; Anette Pustowka; Sarah Mensch; Jan Ferner; Lars Möller; Norbert Bannert; Robert Tampé; Gilles Divita; Yves Mély; Harald Schwalbe; Ursula Dietrich
Journal:  ChemMedChem       Date:  2008-05       Impact factor: 3.466

6.  Synthesis and biological properties of novel pyridinioalkanoyl thiolesters (PATE) as anti-HIV-1 agents that target the viral nucleocapsid protein zinc fingers.

Authors:  J A Turpin; Y Song; J K Inman; M Huang; A Wallqvist; A Maynard; D G Covell; W G Rice; E Appella
Journal:  J Med Chem       Date:  1999-01-14       Impact factor: 7.446

7.  Mechanism of zinc coordination by point-mutated structures of the distal CCHC binding motif of the HIV-1 NCp7 protein.

Authors:  Elisa Bombarda; Bernard P Roques; Yves Mély; Ernst Grell
Journal:  Biochemistry       Date:  2005-05-17       Impact factor: 3.162

Review 8.  Human immunodeficiency virus type-1 transcription: role of the 5'-untranslated leader region (review).

Authors:  L Al-Harthi; K A Roebuck
Journal:  Int J Mol Med       Date:  1998-05       Impact factor: 4.101

9.  Locked nucleic acid containing antisense oligonucleotides enhance inhibition of HIV-1 genome dimerization and inhibit virus replication.

Authors:  Joacim Elmén; Hong-Yan Zhang; Bartek Zuber; Karl Ljungberg; Britta Wahren; Claes Wahlestedt; Zicai Liang
Journal:  FEBS Lett       Date:  2004-12-17       Impact factor: 4.124

10.  Nucleocapsid mutations turn HIV-1 into a DNA-containing virus.

Authors:  Laurent Houzet; Zakia Morichaud; Ludovic Didierlaurent; Delphine Muriaux; Jean-Luc Darlix; Marylène Mougel
Journal:  Nucleic Acids Res       Date:  2008-02-22       Impact factor: 16.971

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  13 in total

1.  A Class of Potent Inhibitors of the HIV-1 Nucleocapsid Protein Based on Aminopyrrolic Scaffolds.

Authors:  Stefano Ciaco; Nicolas Humbert; Eléonore Real; Christian Boudier; Oscar Francesconi; Stefano Roelens; Cristina Nativi; Carole Seguin-Devaux; Mattia Mori; Yves Mély
Journal:  ACS Med Chem Lett       Date:  2020-01-27       Impact factor: 4.345

2.  Multiple in Vitro Inhibition of HIV-1 Proteins by 2,6-Dipeptidyl-anthraquinone Conjugates Targeting the PBS RNA.

Authors:  Elia Gamba; Alice Sosic; Irene Saccone; Elisa Magli; Francesco Frecentese; Barbara Gatto
Journal:  ACS Med Chem Lett       Date:  2020-03-23       Impact factor: 4.345

Review 3.  HIV-1 assembly, release and maturation.

Authors:  Eric O Freed
Journal:  Nat Rev Microbiol       Date:  2015-06-29       Impact factor: 60.633

4.  Probing Mercaptobenzamides as HIV Inactivators via Nucleocapsid Protein 7.

Authors:  Mrinmoy Saha; Michael T Scerba; Nathaniel I Shank; Tracy L Hartman; Caitlin A Buchholz; Robert W Buckheit; Stewart R Durell; Daniel H Appella
Journal:  ChemMedChem       Date:  2017-04-25       Impact factor: 3.466

5.  Nucleocapsid Protein Precursors NCp9 and NCp15 Suppress ATP-Mediated Rescue of AZT-Terminated Primers by HIV-1 Reverse Transcriptase.

Authors:  Moisés A Árquez; Samara Martín-Alonso; Robert J Gorelick; Walter A Scott; Antonio J Acosta-Hoyos; Luis Menéndez-Arias
Journal:  Antimicrob Agents Chemother       Date:  2020-09-21       Impact factor: 5.191

Review 6.  HIV-1 Gag as an Antiviral Target: Development of Assembly and Maturation Inhibitors.

Authors:  Paul Spearman
Journal:  Curr Top Med Chem       Date:  2016       Impact factor: 3.295

7.  Targeting a Dark Excited State of HIV-1 Nucleocapsid by Antiretroviral Thioesters Revealed by NMR Spectroscopy.

Authors:  Lalit Deshmukh; Vitali Tugarinov; Daniel H Appella; G Marius Clore
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-02       Impact factor: 15.336

8.  Alpha-helicoidal HEAT-like Repeat Proteins (αRep) Selected as Interactors of HIV-1 Nucleocapsid Negatively Interfere with Viral Genome Packaging and Virus Maturation.

Authors:  Sudarat Hadpech; Sawitree Nangola; Koollawat Chupradit; Kanda Fanhchaksai; Wilhelm Furnon; Agathe Urvoas; Marie Valerio-Lepiniec; Philippe Minard; Pierre Boulanger; Saw-See Hong; Chatchai Tayapiwatana
Journal:  Sci Rep       Date:  2017-11-27       Impact factor: 4.379

9.  Enhancement of the physicochemical properties of [Pt(dien)(nucleobase)]2+ for HIVNCp7 targeting.

Authors:  S D Tsotsoros; P B Lutz; A G Daniel; E J Peterson; R E F de Paiva; E Rivera; Y Qu; C A Bayse; N P Farrell
Journal:  Chem Sci       Date:  2016-10-06       Impact factor: 9.825

10.  Metal cofactor modulated folding and target recognition of HIV-1 NCp7.

Authors:  Weitong Ren; Dongqing Ji; Xiulian Xu
Journal:  PLoS One       Date:  2018-05-01       Impact factor: 3.240

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