Literature DB >> 25026465

Modelling from the experimental developmental biologists viewpoint.

Andrew D Economou1, Jeremy B A Green2.   

Abstract

In this review we consider Reaction-Diffusion as the archetype of a model in developmental biology. We consider its history in relation to experimental work since it was first proposed in 1952 by Turing and revived in the 1970s by Meinhardt. We then discuss the most recent examples of experiments that address this model, including the challenges that remain in capturing the physico-chemical manifestation of the model mechanism in a real developmental system. Finally we discuss the model's current status and use in the experimental community.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Chemical morphogenesis; LALI; Morphogens; Reaction–Diffusion; Turing systems

Mesh：

Year:  2014        PMID： 25026465      PMCID： PMC4196921          DOI： 10.1016/j.semcdb.2014.07.006

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN： 1084-9521            Impact factor:   7.727


  48 in total

1.  The role of HetN in maintenance of the heterocyst pattern in Anabaena sp. PCC 7120.

Authors:  S M Callahan; W J Buikema
Journal:  Mol Microbiol       Date:  2001-05       Impact factor: 3.501

2.  Pigment pattern formation by contact-dependent depolarization.

Authors:  Masafumi Inaba; Hiroaki Yamanaka; Shigeru Kondo
Journal:  Science       Date:  2012-02-10       Impact factor: 47.728

3.  The influence of gene expression time delays on Gierer-Meinhardt pattern formation systems.

Authors:  S Seirin Lee; E A Gaffney; N A M Monk
Journal:  Bull Math Biol       Date:  2010-03-23       Impact factor: 1.758

4.  Pattern regulation in the stripe of zebrafish suggests an underlying dynamic and autonomous mechanism.

Authors:  Motoomi Yamaguchi; Eiichi Yoshimoto; Shigeru Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-12       Impact factor: 11.205

5.  FGF signalling controls formation of the apical sensory organ in the cnidarian Nematostella vectensis.

Authors:  Fabian Rentzsch; Jens H Fritzenwanker; Corinna B Scholz; Ulrich Technau
Journal:  Development       Date:  2008-05       Impact factor: 6.868

6.  Genetic and cytological evidence that heterocyst patterning is regulated by inhibitor gradients that promote activator decay.

Authors:  Douglas D Risser; Sean M Callahan
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-06       Impact factor: 11.205

7.  EVOLUTION AND MORPHOGENETIC RULES: THE SHAPE OF THE VERTEBRATE LIMB IN ONTOGENY AND PHYLOGENY.

Authors:  George F Oster; Neil Shubin; James D Murray; Pere Alberch
Journal:  Evolution       Date:  1988-09       Impact factor: 3.694

8.  Generation of the primary hair follicle pattern.

Authors:  Chunyan Mou; Ben Jackson; Pascal Schneider; Paul A Overbeek; Denis J Headon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

9.  HetR homodimer is a DNA-binding protein required for heterocyst differentiation, and the DNA-binding activity is inhibited by PatS.

Authors:  Xu Huang; Yuqing Dong; Jindong Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-29       Impact factor: 11.205

10.  The influence of receptor-mediated interactions on reaction-diffusion mechanisms of cellular self-organisation.

Authors:  Václav Klika; Ruth E Baker; Denis Headon; Eamonn A Gaffney
Journal:  Bull Math Biol       Date:  2011-11-10       Impact factor: 1.758
View more
  4 in total

1.  High-throughput mathematical analysis identifies Turing networks for patterning with equally diffusing signals.

Authors:  Luciano Marcon; Xavier Diego; James Sharpe; Patrick Müller
Journal:  Elife       Date:  2016-04-08       Impact factor: 8.140

Review 2.  Forging patterns and making waves from biology to geology: a commentary on Turing (1952) 'The chemical basis of morphogenesis'.

Authors:  Philip Ball
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-04-19       Impact factor: 6.237

3.  A Rho-based reaction-diffusion system governs cell wall patterning in metaxylem vessels.

Authors:  Yoshinobu Nagashima; Satoru Tsugawa; Atsushi Mochizuki; Takema Sasaki; Hiroo Fukuda; Yoshihisa Oda
Journal:  Sci Rep       Date:  2018-08-01       Impact factor: 4.379

4.  Time and space in segmentation.

Authors:  Erik Clark
Journal:  Interface Focus       Date:  2021-04-16       Impact factor: 3.906
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.