Literature DB >> 25024223

The dynamic history of plastid genomes in the Campanulaceae sensu lato is unique among angiosperms.

Eric B Knox1.   

Abstract

Why have some plants lost the organizational stability in plastid genomes (plastomes) that evolved in their algal ancestors? During the endosymbiotic transformation of a cyanobacterium into the eukaryotic plastid, most cyanobacterial genes were transferred to the nucleus or otherwise lost from the plastome, and the resulting plastome architecture in land plants confers organizational stability, as evidenced by the conserved gene order among bryophytes and lycophytes, whereas ferns, gymnosperms, and angiosperms share a single, 30-kb inversion. Although some additional gene losses have occurred, gene additions to angiosperm plastomes were previously unknown. Plastomes in the Campanulaceae sensu lato have incorporated dozens of large ORFs (putative protein-coding genes). These insertions apparently caused many of the 125+ large inversions now known in this small eudicot clade. This phylogenetically restricted phenomenon is not biogeographically localized, which indicates that these ORFs came from the nucleus or (less likely) a cryptic endosymbiont.

Entities:  

Keywords:  Cyphiaceae; Lobeliaceae; foreign DNA; phylogeny

Mesh:

Year:  2014        PMID: 25024223      PMCID: PMC4121848          DOI: 10.1073/pnas.1403363111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

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Review 3.  Merging theory and mechanism in studies of gynodioecy.

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Journal:  Mol Biol Evol       Date:  2007-03-22       Impact factor: 16.240

5.  Uncovering the protein translocon at the chloroplast inner envelope membrane.

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6.  Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants.

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Authors:  Robert K Jansen; Zhengqiu Cai; Linda A Raubeson; Henry Daniell; Claude W Depamphilis; James Leebens-Mack; Kai F Müller; Mary Guisinger-Bellian; Rosemarie C Haberle; Anne K Hansen; Timothy W Chumley; Seung-Bum Lee; Rhiannon Peery; Joel R McNeal; Jennifer V Kuehl; Jeffrey L Boore
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-28       Impact factor: 11.205

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Authors:  Tracey Ruhlman; Seung-Bum Lee; Robert K Jansen; Jessica B Hostetler; Luke J Tallon; Christopher D Town; Henry Daniell
Journal:  BMC Genomics       Date:  2006-08-31       Impact factor: 3.969

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  37 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-26       Impact factor: 11.205

2.  Variable presence of the inverted repeat and plastome stability in Erodium.

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4.  Genome-wide signatures of plastid-nuclear coevolution point to repeated perturbations of plastid proteostasis systems across angiosperms.

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5.  Dynamic Evolution of the Chloroplast Genome in the Green Algal Classes Pedinophyceae and Trebouxiophyceae.

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Journal:  Genome Biol Evol       Date:  2015-07-01       Impact factor: 3.416

6.  Correlation between sequence divergence and polymorphism reveals similar evolutionary mechanisms acting across multiple timescales in a rapidly evolving plastid genome.

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Journal:  BMC Evol Biol       Date:  2014-12-24       Impact factor: 3.260

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9.  Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation.

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