Literature DB >> 25010069

The complete mitochondrial genome sequence of Predatory carp Chanodichthys erythropterus (Cypriniformes: Cyprinidae).

Lin Chen1,2, Bo Li1,2, Lizhi Zhou1,2, Guanghong Zhao1,2.   

Abstract

Predatory carp Chanodichthys erythropterus is a small-sized economic cyprinid fish distributed in East Asia. We sequenced its complete mitochondrial genome by PCR-based method. The mitochondrial DNA is packaged in a compact 16,629 base pair (bp) circular molecule with A + T content of 56.1%. It contains 22 transfer RNA genes, 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, and the non-coding control region (D-loop). All PCGs are initiated by ATG codons, except for COI, which uses GTG as its start codon. Of the 13 PCGs, 12 stop with TAA and TAG, while Cyt b uses incomplete termination codon T. All tRNAs possess the classic cloverleaf secondary structure except for tRNA(Ser)(AGN), which lacks the ''DHU'' stem.

Entities:  

Keywords:  Chanodichthys erythropterus; Complete mitogenome; DNA sequence; gene arrangement

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Substances:

Year:  2014        PMID: 25010069     DOI: 10.3109/19401736.2014.933328

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  2 in total

1.  Molecular Phylogeny of the Opsariichthys Group (Teleostei: Cypriniformes) Based On Complete Mitochondrial Genomes.

Authors:  Shih-Pin Huang; Feng-Yu Wang; Tzi-Yuan Wang
Journal:  Zool Stud       Date:  2017-12-21       Impact factor: 2.058

2.  A chromosome-level genome assembly of the redfin culter (Chanodichthys erythropterus).

Authors:  Shihu Zhao; Xiufeng Yang; Bo Pang; Lei Zhang; Qi Wang; Shangbin He; Huashan Dou; Honghai Zhang
Journal:  Sci Data       Date:  2022-09-01       Impact factor: 8.501

  2 in total

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