Literature DB >> 25005099

Crystallization and preliminary X-ray diffraction analysis of Xyn30D from Paenibacillus barcinonensis.

María Ángela Sainz-Polo1, Susana Valeria Valenzuela2, F Javier Pastor2, Julia Sanz-Aparicio1.   

Abstract

Xyn30D, a new member of a recently identified group of xylanases, has been purified and crystallized. Xyn30D is a bimodular enzyme composed of an N-terminal catalytic domain belonging to glycoside hydrolase family 30 (GH30) and a C-terminal family 35 carbohydrate-binding domain (CBM35) able to bind xylans and glucuronic acid. Xyn30D shares the characteristic endo mode of action described for GH30 xylanases, with the hydrolysis of the β-(1,4) bonds of xylan being directed by α-1,2-linked glucuronate moieties, which have to be placed at the -2 subsite of the xylanase active site. Crystals of the complete enzyme were obtained and a full data set to 2.3 Å resolution was collected using a synchrotron X-ray source. This represents the first bimodular enzyme with the domain architecture GH30-CBM35. This study will contribute to the understanding of the role that the different xylanases play in the depolymerization of glucuronoxylan.

Entities:  

Keywords:  CBM35; GH30; Paenibacillus barcinonensis; xylanase

Mesh:

Substances:

Year:  2014        PMID: 25005099      PMCID: PMC4089542          DOI: 10.1107/S2053230X14012035

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  14 in total

1.  Modular glucuronoxylan-specific xylanase with a family CBM35 carbohydrate-binding module.

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  2 in total

1.  Structural analysis of glucuronoxylan-specific Xyn30D and its attached CBM35 domain gives insights into the role of modularity in specificity.

Authors:  M Angela Sainz-Polo; Susana Valeria Valenzuela; Beatriz González; F I Javier Pastor; Julia Sanz-Aparicio
Journal:  J Biol Chem       Date:  2014-09-08       Impact factor: 5.157

Review 2.  Carbohydrate active enzyme domains from extreme thermophiles: components of a modular toolbox for lignocellulose degradation.

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