Literature DB >> 2500426

Crystal structure analysis of omega-amino acid:pyruvate aminotransferase with a newly developed Weissenberg camera and an imaging plate using synchrotron radiation.

N Watanabe1, K Sakabe, N Sakabe, T Higashi, K Sasaki, S Aibara, Y Morita, K Yonaha, S Toyama, H Fukutani.   

Abstract

The three-dimensional structure of omega-amino acid:pyruvate aminotransferase from Pseudomonas sp. F-126, an isologous alpha 4 tetramer containing pyridoxal 5'-phosphate (PLP) as a cofactor, has been determined at 2.0 A resolution. The diffraction data were collected with a newly developed Weissenberg camera with a Fuji Imaging Plate, using synchrotron radiation. The mean figure-of-merit was 0.57. The subunit is rich in secondary structure and comprises two domains. PLP is located in the large domain. The high homology in the secondary structure between this enzyme and aspartate aminotransferase strongly indicates that these two types of enzymes have evolved from a common ancestor.

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Year:  1989        PMID: 2500426     DOI: 10.1093/oxfordjournals.jbchem.a122600

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  9 in total

1.  Modeling of the spatial structure of eukaryotic ornithine decarboxylases.

Authors:  N V Grishin; M A Phillips; E J Goldsmith
Journal:  Protein Sci       Date:  1995-07       Impact factor: 6.725

2.  Crystallization and preliminary X-ray analysis of phosphoserine aminotransferase from Bacillus circulans subsp. alkalophilus.

Authors:  M Moser; R Müller; N Battchikova; M Koivulehto; T Korpela; J N Jansonius
Journal:  Protein Sci       Date:  1996-07       Impact factor: 6.725

3.  Characterization of biosynthetic enzymes for ectoine as a compatible solute in a moderately halophilic eubacterium, Halomonas elongata.

Authors:  H Ono; K Sawada; N Khunajakr; T Tao; M Yamamoto; M Hiramoto; A Shinmyo; M Takano; Y Murooka
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

4.  Aromatic L-amino acid decarboxylase: conformational change in the flexible region around Arg334 is required during the transaldimination process.

Authors:  S Ishii; H Hayashi; A Okamoto; H Kagamiyama
Journal:  Protein Sci       Date:  1998-08       Impact factor: 6.725

5.  Molecular analysis of two genes of the Escherichia coli gab cluster: nucleotide sequence of the glutamate:succinic semialdehyde transaminase gene (gabT) and characterization of the succinic semialdehyde dehydrogenase gene (gabD).

Authors:  K Bartsch; A von Johnn-Marteville; A Schulz
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

6.  Crystallization and preliminary X-ray crystallographic studies of ω-transaminase from Vibrio fluvialis JS17.

Authors:  Tae-ho Jang; Bokyung Kim; Ok Kyoung Park; Ju Young Bae; Byung-Gee Kim; Hyungdon Yun; Hyun Ho Park
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-07-29

7.  A β-Alanine Catabolism Pathway Containing a Highly Promiscuous ω-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas sp. Strain AAC.

Authors:  Matthew Wilding; Thomas S Peat; Janet Newman; Colin Scott
Journal:  Appl Environ Microbiol       Date:  2016-06-13       Impact factor: 4.792

8.  Single point mutations reveal amino acid residues important for Chromobacterium violaceum transaminase activity in the production of unnatural amino acids.

Authors:  Sarah A Almahboub; Tanja Narancic; Darren Fayne; Kevin E O'Connor
Journal:  Sci Rep       Date:  2018-11-26       Impact factor: 4.379

9.  Structural studies of Pseudomonas and Chromobacterium ω-aminotransferases provide insights into their differing substrate specificity.

Authors:  Christopher Sayer; Michail N Isupov; Aaron Westlake; Jennifer A Littlechild
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-03-14
  9 in total

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