Literature DB >> 24997987

Common variants in the HLA-DQ region confer susceptibility to idiopathic achalasia.

Ines Gockel1, Jessica Becker2, Mira M Wouters3, Stefan Niebisch4, Henning R Gockel4, Timo Hess5, David Ramonet6, Julian Zimmermann6, Ana González Vigo7, Gosia Trynka8, Antonio Ruiz de León9, Julio Pérez de la Serna9, Elena Urcelay7, Vinod Kumar8, Lude Franke8, Harm-Jan Westra8, Daniel Drescher4, Werner Kneist4, Jens U Marquardt10, Peter R Galle10, Manuel Mattheisen11, Vito Annese12, Anna Latiano13, Uberto Fumagalli14, Luigi Laghi15, Rosario Cuomo16, Giovanni Sarnelli16, Michaela Müller17, Alexander J Eckardt17, Jan Tack3, Per Hoffmann18, Stefan Herms18, Elisabeth Mangold5, Stefanie Heilmann5, Ralf Kiesslich19, Burkhard H A von Rahden20, Hans-Dieter Allescher21, Henning G Schulz22, Cisca Wijmenga8, Michael T Heneka6, Hauke Lang4, Karl-Peter Hopfner23, Markus M Nöthen5, Guy E Boeckxstaens3, Paul I W de Bakker24, Michael Knapp25, Johannes Schumacher2.   

Abstract

Idiopathic achalasia is characterized by a failure of the lower esophageal sphincter to relax due to a loss of neurons in the myenteric plexus. This ultimately leads to massive dilatation and an irreversibly impaired megaesophagus. We performed a genetic association study in 1,068 achalasia cases and 4,242 controls and fine-mapped a strong MHC association signal by imputing classical HLA haplotypes and amino acid polymorphisms. An eight-residue insertion at position 227-234 in the cytoplasmic tail of HLA-DQβ1 (encoded by HLA-DQB1*05:03 and HLA-DQB1*06:01) confers the strongest risk for achalasia (P=1.73×10(-19)). In addition, two amino acid substitutions in the extracellular domain of HLA-DQα1 at position 41 (lysine encoded by HLA-DQA1*01:03; P=5.60×10(-10)) and of HLA-DQβ1 at position 45 (glutamic acid encoded by HLA-DQB1*03:01 and HLA-DQB1*03:04; P=1.20×10(-9)) independently confer achalasia risk. Our study implies that immune-mediated processes are involved in the pathophysiology of achalasia.

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Year:  2014        PMID: 24997987     DOI: 10.1038/ng.3029

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  16 in total

1.  Assessment of clinically silent atherosclerotic disease and established and novel risk factors for predicting myocardial infarction and cardiac death in healthy middle-aged subjects: rationale and design of the Heinz Nixdorf RECALL Study. Risk Factors, Evaluation of Coronary Calcium and Lifestyle.

Authors:  Axel Schmermund; Stefan Möhlenkamp; Andreas Stang; Dietrich Grönemeyer; Rainer Seibel; Herbert Hirche; Klaus Mann; Winfried Siffert; Karl Lauterbach; Johannes Siegrist; Karl-Heinz Jöckel; Raimund Erbel
Journal:  Am Heart J       Date:  2002-08       Impact factor: 4.749

2.  Allele-specific expression of the cytoplasmic exon of HLA-DQB1 gene.

Authors:  S Senju; A Kimura; M Yasunami; N Kamikawaji; H Yoshizumi; Y Nishimura; T Sasazuki
Journal:  Immunogenetics       Date:  1992       Impact factor: 2.846

3.  A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals.

Authors:  Brian L Browning; Sharon R Browning
Journal:  Am J Hum Genet       Date:  2009-02-05       Impact factor: 11.025

Review 4.  Genetic insights into common pathways and complex relationships among immune-mediated diseases.

Authors:  Miles Parkes; Adrian Cortes; David A van Heel; Matthew A Brown
Journal:  Nat Rev Genet       Date:  2013-08-06       Impact factor: 53.242

5.  Structural and functional studies of trans-encoded HLA-DQ2.3 (DQA1*03:01/DQB1*02:01) protein molecule.

Authors:  Stig Tollefsen; Kinya Hotta; Xi Chen; Bjørg Simonsen; Kunchithapadam Swaminathan; Irimpan I Mathews; Ludvig M Sollid; Chu-Young Kim
Journal:  J Biol Chem       Date:  2012-02-23       Impact factor: 5.157

Review 6.  Etiology and pathogenesis of achalasia: the current understanding.

Authors:  Woosuk Park; Michael F Vaezi
Journal:  Am J Gastroenterol       Date:  2005-06       Impact factor: 10.864

Review 7.  Achalasia: will genetic studies provide insights?

Authors:  Henning R Gockel; Johannes Schumacher; Ines Gockel; Hauke Lang; Thomas Haaf; Markus M Nöthen
Journal:  Hum Genet       Date:  2010-08-11       Impact factor: 4.132

8.  The IMGT/HLA database.

Authors:  James Robinson; Kavita Mistry; Hamish McWilliam; Rodrigo Lopez; Peter Parham; Steven G E Marsh
Journal:  Nucleic Acids Res       Date:  2010-11-11       Impact factor: 16.971

9.  Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis.

Authors:  Soumya Raychaudhuri; Cynthia Sandor; Eli A Stahl; Jan Freudenberg; Hye-Soon Lee; Xiaoming Jia; Lars Alfredsson; Leonid Padyukov; Lars Klareskog; Jane Worthington; Katherine A Siminovitch; Sang-Cheol Bae; Robert M Plenge; Peter K Gregersen; Paul I W de Bakker
Journal:  Nat Genet       Date:  2012-01-29       Impact factor: 38.330

10.  Imputing amino acid polymorphisms in human leukocyte antigens.

Authors:  Xiaoming Jia; Buhm Han; Suna Onengut-Gumuscu; Wei-Min Chen; Patrick J Concannon; Stephen S Rich; Soumya Raychaudhuri; Paul I W de Bakker
Journal:  PLoS One       Date:  2013-06-06       Impact factor: 3.240

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  31 in total

1.  Gastrointestinal dysfunction in autism displayed by altered motility and achalasia in Foxp1 +/- mice.

Authors:  Henning Fröhlich; Marie Luise Kollmeyer; Valerie Catherine Linz; Manuel Stuhlinger; Dieter Groneberg; Amelie Reigl; Eugen Zizer; Andreas Friebe; Beate Niesler; Gudrun Rappold
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-14       Impact factor: 11.205

2.  Esophagus-Related Symptoms in First-Degree Relatives of Patients with Achalasia: Is Screening Necessary?

Authors:  Henning R Gockel; Moritz Lesse; Johannes Schumacher; Michaela Müller; Ines Gockel
Journal:  Visc Med       Date:  2016-08-17

3.  Allele-specific transcriptional activity of the variable number of tandem repeats of the inducible nitric oxide synthase gene is associated with idiopathic achalasia.

Authors:  Giovanni Sarnelli; Michela Grosso; Ilaria Palumbo; Marcella Pesce; Alessandra D'Alessandro; Giovanni Zaninotto; Vito Annese; Raffaella Petruzzelli; Paola Izzo; Rossana Sepulveres; Dario Bruzzese; Giuseppe Esposito; Rosario Cuomo
Journal:  United European Gastroenterol J       Date:  2016-07-08       Impact factor: 4.623

Review 4.  [Esophageal motility disorders].

Authors:  M Müller; I Gockel
Journal:  Internist (Berl)       Date:  2015-06       Impact factor: 0.743

Review 5.  Esophageal motility disorders: new perspectives from high-resolution manometry and histopathology.

Authors:  Hiroki Sato; Kazuya Takahashi; Ken-Ichi Mizuno; Satoru Hashimoto; Junji Yokoyama; Go Hasegawa; Shuji Terai
Journal:  J Gastroenterol       Date:  2017-11-13       Impact factor: 7.527

Review 6.  Disorders of the enteric nervous system - a holistic view.

Authors:  Beate Niesler; Stefanie Kuerten; I Ekin Demir; Karl-Herbert Schäfer
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2021-01-29       Impact factor: 46.802

7.  Variation at HLA-DRB1 is associated with resistance to enteric fever.

Authors:  Sarah J Dunstan; Nguyen Thi Hue; Buhm Han; Zheng Li; Trinh Thi Bich Tram; Kar Seng Sim; Christopher M Parry; Nguyen Tran Chinh; Ha Vinh; Nguyen Phu Huong Lan; Nga Tran Vu Thieu; Phat Voong Vinh; Samir Koirala; Sabina Dongol; Amit Arjyal; Abhilasha Karkey; Olita Shilpakar; Christiane Dolecek; Jia Nee Foo; Le Thi Phuong; Mai Ngoc Lanh; Tan Do; Tin Aung; Do Nu Hon; Yik Ying Teo; Martin L Hibberd; Katherine L Anders; Yukinori Okada; Soumya Raychaudhuri; Cameron P Simmons; Stephen Baker; Paul I W de Bakker; Buddha Basnyat; Tran Tinh Hien; Jeremy J Farrar; Chiea Chuen Khor
Journal:  Nat Genet       Date:  2014-11-10       Impact factor: 38.330

8.  Epidemiological analysis of achalasia in Japan using a large-scale claims database.

Authors:  Hiroki Sato; Hiroshi Yokomichi; Kazuya Takahashi; Kentaro Tominaga; Takeshi Mizusawa; Naruhiro Kimura; Yuzo Kawata; Shuji Terai
Journal:  J Gastroenterol       Date:  2019-01-03       Impact factor: 7.527

9.  An Overview of Achalasia and Its Subtypes.

Authors:  Dhyanesh A Patel; Brian M Lappas; Michael F Vaezi
Journal:  Gastroenterol Hepatol (N Y)       Date:  2017-07

10.  The HLA-DQβ1 insertion is a strong achalasia risk factor and displays a geospatial north-south gradient among Europeans.

Authors:  Jessica Becker; Stephan L Haas; Anna Mokrowiecka; Justyna Wasielica-Berger; Zeeshan Ateeb; Jonna Bister; Peter Elbe; Marek Kowalski; Magdalena Gawron-Kiszka; Marek Majewski; Agata Mulak; Maria Janiak; Mira M Wouters; Till Schwämmle; Timo Hess; Lothar Veits; Stefan Niebisch; José L Santiago; Antonio Ruiz de León; Julio Pérez de la Serna; Elena Urcelay; Vito Annese; Anna Latiano; Uberto Fumagalli; Riccardo Rosati; Luigi Laghi; Rosario Cuomo; Frank Lenze; Giovanni Sarnelli; Michaela Müller; Burkhard Ha von Rahden; Cisca Wijmenga; Hauke Lang; Kamila Czene; Per Hall; Paul Iw de Bakker; Michael Vieth; Markus M Nöthen; Henning G Schulz; Krystian Adrych; Anita Gąsiorowska; Leszek Paradowski; Grzegorz Wallner; Guy E Boeckxstaens; Ines Gockel; Marek Hartleb; Srdjan Kostic; Anna Dziurkowska-Marek; Mats Lindblad; Magnus Nilsson; Michael Knapp; Anders Thorell; Tomasz Marek; Andrzej Dąbrowski; Ewa Małecka-Panas; Johannes Schumacher
Journal:  Eur J Hum Genet       Date:  2016-01-06       Impact factor: 4.246

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