Literature DB >> 24997444

Exploiting the proteomics revolution in biotechnology: from disease and antibody targets to optimizing bioprocess development.

Kelley M Heffner1, Deniz Baycin Hizal2, Amit Kumar3, Joseph Shiloach4, Jie Zhu2, Michael A Bowen2, Michael J Betenbaugh1.   

Abstract

Recent advancements in proteomics have enabled the generation of high-quality data sets useful for applications ranging from target and monoclonal antibody (mAB) discovery to bioprocess optimization. Comparative proteomics approaches have recently been used to identify novel disease targets in oncology and other disease conditions. Proteomics has also been applied as a new avenue for mAb discovery. Finally, CHO and Escherichia coli cells represent the dominant production hosts for biopharmaceutical development, yet the physiology of these cells types has yet to be fully established. Proteomics approaches can provide new insights into these cell types, aiding in recombinant protein production, cell growth regulation, and medium formulation. Optimization of sample preparations and protein database developments are enhancing the quantity and accuracy of proteomic results. In these ways, innovations in proteomics are enriching biotechnology and bioprocessing research across a wide spectrum of applications.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Year:  2014        PMID: 24997444      PMCID: PMC9536114          DOI: 10.1016/j.copbio.2014.06.006

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   10.279


  41 in total

1.  A proteomics approach for the identification and cloning of monoclonal antibodies from serum.

Authors:  Wan Cheung Cheung; Sean A Beausoleil; Xiaowu Zhang; Shuji Sato; Sandra M Schieferl; James S Wieler; Jason G Beaudet; Ravi K Ramenani; Lana Popova; Michael J Comb; John Rush; Roberto D Polakiewicz
Journal:  Nat Biotechnol       Date:  2012-03-25       Impact factor: 54.908

Review 2.  Shotgun proteomics using the iTRAQ isobaric tags.

Authors:  Kunal Aggarwal; Leila H Choe; Kelvin H Lee
Journal:  Brief Funct Genomic Proteomic       Date:  2006-05-10

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Resin-based investigation of acyl carrier protein interaction networks in Escherichia coli.

Authors:  Michael Rothmann; Sherry Niessen; Robert W Haushalter; Benjamin F Cravatt; Michael D Burkart
Journal:  Bioorg Med Chem       Date:  2011-10-31       Impact factor: 3.641

5.  Identifying the CHO secretome using mucin-type O-linked glycosylation and click-chemistry.

Authors:  Peter G Slade; Mahbod Hajivandi; Cheryl Moody Bartel; Stephen F Gorfien
Journal:  J Proteome Res       Date:  2012-11-19       Impact factor: 4.466

6.  Proteomic analysis of Chinese hamster ovary cells.

Authors:  Deniz Baycin-Hizal; David L Tabb; Raghothama Chaerkady; Lily Chen; Nathan E Lewis; Harish Nagarajan; Vishaldeep Sarkaria; Amit Kumar; Daniel Wolozny; Joe Colao; Elena Jacobson; Yuan Tian; Robert N O'Meally; Sharon S Krag; Robert N Cole; Bernhard O Palsson; Hui Zhang; Michael Betenbaugh
Journal:  J Proteome Res       Date:  2012-10-05       Impact factor: 4.466

7.  Analysis of dynamic changes in the proteome of a Bcl-XL overexpressing Chinese hamster ovary cell culture during exponential and stationary phases.

Authors:  Tyler Carlage; Rashmi Kshirsagar; Li Zang; Vijay Janakiraman; Marina Hincapie; Yelena Lyubarskaya; Andy Weiskopf; William S Hancock
Journal:  Biotechnol Prog       Date:  2012-05-02

8.  Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome.

Authors:  Nathan E Lewis; Xin Liu; Yuxiang Li; Harish Nagarajan; George Yerganian; Edward O'Brien; Aarash Bordbar; Anne M Roth; Jeffrey Rosenbloom; Chao Bian; Min Xie; Wenbin Chen; Ning Li; Deniz Baycin-Hizal; Haythem Latif; Jochen Forster; Michael J Betenbaugh; Iman Famili; Xun Xu; Jun Wang; Bernhard O Palsson
Journal:  Nat Biotechnol       Date:  2013-07-21       Impact factor: 54.908

9.  Recovery of Chinese hamster ovary host cell proteins for proteomic analysis.

Authors:  Kristin N Valente; Amy K Schaefer; Hannah R Kempton; Abraham M Lenhoff; Kelvin H Lee
Journal:  Biotechnol J       Date:  2013-12-10       Impact factor: 4.677

10.  Mitotic spindle proteomics in Chinese hamster ovary cells.

Authors:  Mary Kate Bonner; Daniel S Poole; Tao Xu; Ali Sarkeshik; John R Yates; Ahna R Skop
Journal:  PLoS One       Date:  2011-05-27       Impact factor: 3.240

View more
  4 in total

Review 1.  The future of host cell protein (HCP) identification during process development and manufacturing linked to a risk-based management for their control.

Authors:  Daniel G Bracewell; Richard Francis; C Mark Smales
Journal:  Biotechnol Bioeng       Date:  2015-07-14       Impact factor: 4.530

Review 2.  Bioconversion of Lignocellulosic Biomass into Value Added Products under Anaerobic Conditions: Insight into Proteomic Studies.

Authors:  Martha Inés Vélez-Mercado; Alicia Guadalupe Talavera-Caro; Karla María Escobedo-Uribe; Salvador Sánchez-Muñoz; Miriam Paulina Luévanos-Escareño; Fernando Hernández-Terán; Alejandra Alvarado; Nagamani Balagurusamy
Journal:  Int J Mol Sci       Date:  2021-11-12       Impact factor: 5.923

3.  Comparative systeomics to elucidate physiological differences between CHO and SP2/0 cell lines.

Authors:  Deniz Demirhan; Amit Kumar; Jie Zhu; Pi Camilla Poulsen; Natalia I Majewska; Yinong Sebastian; Raghothama Chaerkady; Wen Yu; Wei Zhu; Li Zhuang; Punit Shah; Kristen Lekstrom; Robert N Cole; Hui Zhang; Michael J Betenbaugh; Michael A Bowen
Journal:  Sci Rep       Date:  2022-02-28       Impact factor: 4.379

Review 4.  Posttranslational Modifications and the Immunogenicity of Biotherapeutics.

Authors:  Roy Jefferis
Journal:  J Immunol Res       Date:  2016-04-14       Impact factor: 4.818

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.