Literature DB >> 24996012

Cellular barcoding: a technical appraisal.

Shalin H Naik1, Ton N Schumacher2, Leïla Perié3.   

Abstract

Cellular barcoding involves the tagging of individual cells of interest with unique genetic heritable identifiers or barcodes and is emerging as a powerful tool to address individual cell fates on a large scale. However, as with many new technologies, diverse technical and analytical challenges have emerged. Here, we review those challenges and highlight both the power and limitations of cellular barcoding. We then illustrate the contribution of cellular barcoding to the understanding of hematopoiesis and outline the future potential of this technology.
Copyright © 2014 ISEH - International Society for Experimental Hematology. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24996012     DOI: 10.1016/j.exphem.2014.05.003

Source DB:  PubMed          Journal:  Exp Hematol        ISSN: 0301-472X            Impact factor:   3.084


  29 in total

Review 1.  BAR-Seq clonal tracking of gene-edited cells.

Authors:  Samuele Ferrari; Stefano Beretta; Aurelien Jacob; Davide Cittaro; Luisa Albano; Ivan Merelli; Luigi Naldini; Pietro Genovese
Journal:  Nat Protoc       Date:  2021-05-24       Impact factor: 13.491

2.  Developmental barcoding of whole mouse via homing CRISPR.

Authors:  Reza Kalhor; Kian Kalhor; Leo Mejia; Kathleen Leeper; Amanda Graveline; Prashant Mali; George M Church
Journal:  Science       Date:  2018-08-09       Impact factor: 47.728

3.  DNA Barcoding Reveals Habitual Clonal Dominance of Myeloma Plasma Cells in the Bone Marrow Microenvironment.

Authors:  Duncan R Hewett; Kate Vandyke; David M Lawrence; Natasha Friend; Jacqueline E Noll; Joel M Geoghegan; Peter I Croucher; Andrew C W Zannettino
Journal:  Neoplasia       Date:  2017-11-05       Impact factor: 5.715

Review 4.  Liquid biopsies come of age: towards implementation of circulating tumour DNA.

Authors:  Jonathan C M Wan; Charles Massie; Javier Garcia-Corbacho; Florent Mouliere; James D Brenton; Carlos Caldas; Simon Pacey; Richard Baird; Nitzan Rosenfeld
Journal:  Nat Rev Cancer       Date:  2017-02-24       Impact factor: 60.716

5.  Lentiviral Barcode Labeling and Transplantation of Fetal Liver Hematopoietic Stem and Progenitor Cells.

Authors:  Trine A Kristiansen; Alexander Doyle; Joan Yuan
Journal:  Bio Protoc       Date:  2017-04-20

6.  DNA barcoded competitive clone-initiating cell analysis reveals novel features of metastatic growth in a cancer xenograft model.

Authors:  Syed Mohammed Musheer Aalam; Xiaojia Tang; Jianning Song; Upasana Ray; Stephen J Russell; S John Weroha; Jamie Bakkum-Gamez; Viji Shridhar; Mark E Sherman; Connie J Eaves; David J H F Knapp; Krishna R Kalari; Nagarajan Kannan
Journal:  NAR Cancer       Date:  2022-07-22

7.  Genetic Tagging During Human Mesoderm Differentiation Reveals Tripotent Lateral Plate Mesodermal Progenitors.

Authors:  Chee Jia Chin; Aaron R Cooper; Georgia R Lill; Denis Evseenko; Yuhua Zhu; Chong Bin He; David Casero; Matteo Pellegrini; Donald B Kohn; Gay M Crooks
Journal:  Stem Cells       Date:  2016-03-28       Impact factor: 6.277

Review 8.  Genomic and Epigenomic Alterations in Cancer.

Authors:  Balabhadrapatruni V S K Chakravarthi; Saroj Nepal; Sooryanarayana Varambally
Journal:  Am J Pathol       Date:  2016-07       Impact factor: 4.307

9.  Lineage tracing on transcriptional landscapes links state to fate during differentiation.

Authors:  Caleb Weinreb; Alejo Rodriguez-Fraticelli; Fernando D Camargo; Allon M Klein
Journal:  Science       Date:  2020-01-23       Impact factor: 47.728

Review 10.  Genetic models of human and mouse dendritic cell development and function.

Authors:  David A Anderson; Charles-Antoine Dutertre; Florent Ginhoux; Kenneth M Murphy
Journal:  Nat Rev Immunol       Date:  2020-09-09       Impact factor: 53.106

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