Literature DB >> 24987160

Quantitative Relationship of Soil Texture with the Observed Population Density Reduction of Heterodera glycines after Annual Corn Rotation in Nebraska.

Oscar Pérez-Hernández1, Loren J Giesler1.   

Abstract

Soil texture has been commonly associated with the population density of Heterodera glycines (soybean cyst nematode: SCN), but such an association has been mainly described in terms of textural classes. In this study, multivariate analysis and a generalized linear modeling approach were used to elucidate the quantitative relationship of soil texture with the observed SCN population density reduction after annual corn rotation in Nebraska. Forty-five commercial production fields were sampled in 2009, 2010, and 2011 and SCN population density (eggs/100 cm(3) of soil) for each field was determined before (Pi) and after (Pf) annual corn rotation from ten 3 × 3-m sampling grids. Principal components analysis revealed that, compared with silt and clay, sand had a stronger association with SCN Pi and Pf. Cluster analysis using the average linkage method and confirmed through 1,000 bootstrap simulations identified two groups: one corresponding to predominant silt-and-clay fields and other to sand-predominant fields. This grouping suggested that SCN relative percent population decline was higher in the sandy than in the silt-and-clay predominant group. However, when groups were compared for their SCN population density reduction using Pf as the response, Pi as a covariate, and incorporating the year and field variability, a negative binomial generalized linear model indicated that the SCN population density reduction was not statistically different between the sand-predominant field group and the silt-and-clay predominant group.

Entities:  

Keywords:  Heterodera glycines; corn rotation; ecology; multivariate analysis; negative binomial; soil texture; soybean cyst nematode

Year:  2014        PMID: 24987160      PMCID: PMC4077176     

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  10 in total

1.  Pvclust: an R package for assessing the uncertainty in hierarchical clustering.

Authors:  Ryota Suzuki; Hidetoshi Shimodaira
Journal:  Bioinformatics       Date:  2006-04-04       Impact factor: 6.937

2.  Comparative efficiency of the fenwick can and schuiling centrifuge in extracting nematode cysts from different soil types.

Authors:  Joaquim Bellvert; Kieran Crombie; Finbarr G Horgan
Journal:  J Nematol       Date:  2008-03       Impact factor: 1.402

3.  Small sample inference for fixed effects from restricted maximum likelihood.

Authors:  M G Kenward; J H Roger
Journal:  Biometrics       Date:  1997-09       Impact factor: 2.571

4.  Bootstrap confidence levels for phylogenetic trees.

Authors:  B Efron; E Halloran; S Holmes
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

5.  Development of Heterodera glycines Life Stages as Influenced by Temperature.

Authors:  D G Alston; D P Schmitt
Journal:  J Nematol       Date:  1988-07       Impact factor: 1.402

6.  Effect of Within-field Variation in Soil Texture on Heterodera glycines and Soybean Yield.

Authors:  S R Koenning; S C Anand; J A Wrather
Journal:  J Nematol       Date:  1988-07       Impact factor: 1.402

7.  Multivariate Analysis of Selected Edaphic Factors and Their Relationship to Heterodera glycines Population Density.

Authors:  L J Francl
Journal:  J Nematol       Date:  1993-06       Impact factor: 1.402

8.  Heterodera glycines Infectivity and Egg Viability Following Nonhost Crops and During Overwintering.

Authors:  T A Jackson; G S Smith; T L Niblack
Journal:  J Nematol       Date:  2005-09       Impact factor: 1.402

9.  The Effect of Temperature and Moisture on the Survival of Heterodera glycines in the Absence of a Host.

Authors:  D A Slack; R D Riggs; M L Hamblen
Journal:  J Nematol       Date:  1972-10       Impact factor: 1.402

10.  Soybean Brown Stem Rot, Phytophthora sojae, and Heterodera glycines Affected by Soil Texture and Tillage Relations.

Authors:  F Workneh; X B Yang; G L Tylka
Journal:  Phytopathology       Date:  1999-10       Impact factor: 4.025

  10 in total

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