Literature DB >> 24985823

AtomicJ: an open source software for analysis of force curves.

Paweł Hermanowicz1, Michał Sarna2, Kvetoslava Burda2, Halina Gabryś1.   

Abstract

We present an open source Java application for analysis of force curves and images recorded with the Atomic Force Microscope. AtomicJ supports a wide range of contact mechanics models and implements procedures that reduce the influence of deviations from the contact model. It generates maps of mechanical properties, including maps of Young's modulus, adhesion force, and sample height. It can also calculate stacks, which reveal how sample's response to deformation changes with indentation depth. AtomicJ analyzes force curves concurrently on multiple threads, which allows for high speed of analysis. It runs on all popular operating systems, including Windows, Linux, and Macintosh.

Mesh:

Year:  2014        PMID: 24985823     DOI: 10.1063/1.4881683

Source DB:  PubMed          Journal:  Rev Sci Instrum        ISSN: 0034-6748            Impact factor:   1.523


  39 in total

1.  Collagen content and extracellular matrix cause cytoskeletal remodelling in pancreatic fibroblasts.

Authors:  Andreas Stylianou; Vasiliki Gkretsi; Maria Louca; Lefteris C Zacharia; Triantafyllos Stylianopoulos
Journal:  J R Soc Interface       Date:  2019-05-31       Impact factor: 4.118

2.  Fatigue loading of tendon results in collagen kinking and denaturation but does not change local tissue mechanics.

Authors:  Spencer E Szczesny; Céline Aeppli; Alexander David; Robert L Mauck
Journal:  J Biomech       Date:  2018-02-21       Impact factor: 2.712

3.  A new role for host annexin A2 in establishing bacterial adhesion to vascular endothelial cells: lines of evidence from atomic force microscopy and an in vivo study.

Authors:  Xi He; Weiwei Zhang; Qing Chang; Zhengchen Su; Dejun Gong; Yixuan Zhou; Jie Xiao; Aleksandra Drelich; Yakun Liu; Vsevolod Popov; Xin Zhao; Maki Wakamiya; Angelo Gaitas; Fangling Lu; Bin Gong
Journal:  Lab Invest       Date:  2019-06-28       Impact factor: 5.662

4.  RGD-modified dextran hydrogel promotes follicle growth in three-dimensional ovarian tissue culture in mice.

Authors:  Cassandra Matsushige; Xiaojie Xu; Marissa Miyagi; Yi Y Zuo; Yukiko Yamazaki
Journal:  Theriogenology       Date:  2022-02-17       Impact factor: 2.740

5.  Bimodal Nanocomposite Platform with Antibiofilm and Self-Powering Functionalities for Biomedical Applications.

Authors:  Atul Dhall; Sayemul Islam; Moonchul Park; Yu Zhang; Albert Kim; Geelsu Hwang
Journal:  ACS Appl Mater Interfaces       Date:  2021-08-18       Impact factor: 10.383

6.  Intervening in Symbiotic Cross-Kingdom Biofilm Interactions: a Binding Mechanism-Based Nonmicrobicidal Approach.

Authors:  H E Kim; A Dhall; Y Liu; M Bawazir; H Koo; G Hwang
Journal:  mBio       Date:  2021-05-18       Impact factor: 7.867

7.  Undifferentiated bronchial fibroblasts derived from asthmatic patients display higher elastic modulus than their non-asthmatic counterparts.

Authors:  Michal Sarna; Katarzyna A Wojcik; Pawel Hermanowicz; Dawid Wnuk; Kvetoslava Burda; Marek Sanak; Jarosław Czyż; Marta Michalik
Journal:  PLoS One       Date:  2015-02-13       Impact factor: 3.240

8.  Combined strategies for optimal detection of the contact point in AFM force-indentation curves obtained on thin samples and adherent cells.

Authors:  Núria Gavara
Journal:  Sci Rep       Date:  2016-02-19       Impact factor: 4.379

9.  Transforming growth factor-β modulates pancreatic cancer associated fibroblasts cell shape, stiffness and invasion.

Authors:  Andreas Stylianou; Vasiliki Gkretsi; Triantafyllos Stylianopoulos
Journal:  Biochim Biophys Acta Gen Subj       Date:  2018-03-15       Impact factor: 3.770

10.  Improving Fibrin Hydrogels' Mechanical Properties, through Addition of Silica or Chitosan-Silica Materials, for Potential Application as Wound Dressings.

Authors:  Natalia Y Becerra; Luz M Restrepo; Yessika Galeano; Ana C Tobón; Luis F Turizo; Monica Mesa
Journal:  Int J Biomater       Date:  2021-06-02
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.