Literature DB >> 24983800

Protein molecular data from ancient (>1 million years old) fossil material: pitfalls, possibilities and grand challenges.

Mary Higby Schweitzer1, Elena R Schroeter, Michael B Goshe.   

Abstract

Advances in resolution and sensitivity of analytical techniques have provided novel applications, including the analyses of fossil material. However, the recovery of original proteinaceous components from very old fossil samples (defined as >1 million years (1 Ma) from previously named limits in the literature) is far from trivial. Here, we discuss the challenges to recovery of proteinaceous components from fossils, and the need for new sample preparation techniques, analytical methods, and bioinformatics to optimize and fully utilize the great potential of information locked in the fossil record. We present evidence for survival of original components across geological time, and discuss the potential benefits of recovery, analyses, and interpretation of fossil materials older than 1 Ma, both within and outside of the fields of evolutionary biology.

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Year:  2014        PMID: 24983800     DOI: 10.1021/ac500803w

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  3 in total

1.  Protein sequences bound to mineral surfaces persist into deep time.

Authors:  Beatrice Demarchi; Shaun Hall; Teresa Roncal-Herrero; Colin L Freeman; Jos Woolley; Molly K Crisp; Julie Wilson; Anna Fotakis; Roman Fischer; Benedikt M Kessler; Rosa Rakownikow Jersie-Christensen; Jesper V Olsen; James Haile; Jessica Thomas; Curtis W Marean; John Parkington; Samantha Presslee; Julia Lee-Thorp; Peter Ditchfield; Jacqueline F Hamilton; Martyn W Ward; Chunting Michelle Wang; Marvin D Shaw; Terry Harrison; Manuel Domínguez-Rodrigo; Ross DE MacPhee; Amandus Kwekason; Michaela Ecker; Liora Kolska Horwitz; Michael Chazan; Roland Kröger; Jane Thomas-Oates; John H Harding; Enrico Cappellini; Kirsty Penkman; Matthew J Collins
Journal:  Elife       Date:  2016-09-27       Impact factor: 8.140

2.  Bone protein "extractomics": comparing the efficiency of bone protein extractions of Gallus gallus in tandem mass spectrometry, with an eye towards paleoproteomics.

Authors:  Elena R Schroeter; Caroline J DeHart; Mary H Schweitzer; Paul M Thomas; Neil L Kelleher
Journal:  PeerJ       Date:  2016-10-27       Impact factor: 2.984

Review 3.  Resurrecting the Dead (Molecules).

Authors:  Jan Zaucha; Jonathan G Heddle
Journal:  Comput Struct Biotechnol J       Date:  2017-05-30       Impact factor: 7.271

  3 in total

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