Literature DB >> 24980713

An integrated bioinformatics infrastructure essential for advancing pharmacogenomics and personalized medicine in the context of the FDA's Critical Path Initiative.

Weida Tong1, Stephen C Harris2, Hong Fang3, Leming Shi2, Roger Perkins3, Federico Goodsaid4, Felix W Frueh4.   

Abstract

Pharmacogenomics (PGx) is identified in the FDA Critical Path document as a major opportunity for advancing medical product development and personalized medicine. An integrated bioinformatics infrastructure for use in FDA data review is crucial to realize the benefits of PGx for public health. We have developed an integrated bioinformatics tool, called ArrayTrack, for managing, analyzing and interpreting genomic and other biomarker data (e.g. proteomic and metabolomic data). ArrayTrack is a highly flexible and robust software platform, which allows evolving with technological advances and changing user needs. ArrayTrack is used in the routine review of genomic data submitted to the FDA; here, three hypothetical examples of its use in the Voluntary eXploratory Data Submission (VXDS) program are illustrated.: © Published by Elsevier Ltd.

Entities:  

Year:  2007        PMID: 24980713     DOI: 10.1016/j.ddtec.2007.10.008

Source DB:  PubMed          Journal:  Drug Discov Today Technol        ISSN: 1740-6749


  5 in total

Review 1.  ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research--an update.

Authors:  Joshua Xu; Reagan Kelly; Hong Fang; Weida Tong
Journal:  Hum Genomics       Date:  2010-08       Impact factor: 4.639

2.  Towards interoperable reporting standards for omics data: hopes and hurdles.

Authors:  Susanna-Assunta Sansone; Philippe Rocca-Serra; Dawn Field; Chris F Taylor; Weida Tong; Marco Brandizi; Eamonn Maguire; Nataliya Sklyar
Journal:  Summit Transl Bioinform       Date:  2009-03-01

3.  An experimental approach for selecting appropriate rodent diets for research studies on metabolic disorders.

Authors:  Suja Rani Sasidharan; Joshua Allan Joseph; Senthilkumar Anandakumar; Vijayabalaji Venkatesan; Chandrasekharan Nair Ariyattu Madhavan; Amit Agarwal
Journal:  Biomed Res Int       Date:  2013-09-15       Impact factor: 3.411

4.  Antidiabetic and Hypolipidemic Activities of Curculigo latifolia Fruit:Root Extract in High Fat Fed Diet and Low Dose STZ Induced Diabetic Rats.

Authors:  Nur Akmal Ishak; Maznah Ismail; Muhajir Hamid; Zalinah Ahmad; Siti Aisyah Abd Ghafar
Journal:  Evid Based Complement Alternat Med       Date:  2013-05-15       Impact factor: 2.629

Review 5.  The FDA's Experience with Emerging Genomics Technologies-Past, Present, and Future.

Authors:  Joshua Xu; Shraddha Thakkar; Binsheng Gong; Weida Tong
Journal:  AAPS J       Date:  2016-04-26       Impact factor: 4.009

  5 in total

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