Literature DB >> 24980530

Progress in combinatorial biosynthesis for drug discovery.

Steven G Van Lanen1, Ben Shen2.   

Abstract

Combinatorial biosynthesis, the process of genetic manipulations of natural product biosynthetic machinery for structural diversity, depends on several factors, and discussed here are two critical factors: access to genetic information and biochemical characterization of enzymes. Examples of the former include using predictions for the biosynthesis of unusual chemical entities such as aminohydroxybenzoic acid starter units, methoxymalonylate extender units, the enediyne core and bacterial aromatic polyketides. The latter aspect includes the continued elucidation of domain functionalities of modular polyketide synthases and nonribosomal peptide synthases and novel biochemical pathways such as the biosynthesis of a cyclopropyl unit and a β-hydroxyl acid. Finally, examples of successful combinatorial biosynthesis for daptomycin and indolocarbozole compounds are discussed.: © Published by Elsevier Ltd.

Entities:  

Year:  2006        PMID: 24980530     DOI: 10.1016/j.ddtec.2006.09.014

Source DB:  PubMed          Journal:  Drug Discov Today Technol        ISSN: 1740-6749


  6 in total

1.  The crystal structure and mechanism of an unusual oxidoreductase, GilR, involved in gilvocarcin V biosynthesis.

Authors:  Nicholas Noinaj; Mary A Bosserman; M Alexandra Schickli; Grzegorz Piszczek; Madan K Kharel; Pallab Pahari; Susan K Buchanan; Jürgen Rohr
Journal:  J Biol Chem       Date:  2011-05-10       Impact factor: 5.157

2.  Cloning and characterization of the ravidomycin and chrysomycin biosynthetic gene clusters.

Authors:  Madan K Kharel; S Eric Nybo; Micah D Shepherd; Jürgen Rohr
Journal:  Chembiochem       Date:  2010-03-01       Impact factor: 3.164

3.  Discovery of the leinamycin family of natural products by mining actinobacterial genomes.

Authors:  Guohui Pan; Zhengren Xu; Zhikai Guo; Ming Ma; Dong Yang; Hao Zhou; Yannick Gansemans; Xiangcheng Zhu; Yong Huang; Li-Xing Zhao; Yi Jiang; Jinhua Cheng; Filip Van Nieuwerburgh; Joo-Won Suh; Yanwen Duan; Ben Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-11       Impact factor: 11.205

4.  Glycopeptide antitumor antibiotic zorbamycin from Streptomyces flavoviridis ATCC 21892: strain improvement and structure elucidation.

Authors:  Liyan Wang; Bong-Sik Yun; Nicholas P George; Evelyn Wendt-Pienkowski; Ute Galm; Tae-Jin Oh; Jane M Coughlin; Guodong Zhang; Meifeng Tao; Ben Shen
Journal:  J Nat Prod       Date:  2007-02-21       Impact factor: 4.050

5.  Mitomycins syntheses: a recent update.

Authors:  Jean-Christophe Andrez
Journal:  Beilstein J Org Chem       Date:  2009-07-08       Impact factor: 2.883

6.  NORINE: a database of nonribosomal peptides.

Authors:  Ségolène Caboche; Maude Pupin; Valérie Leclère; Arnaud Fontaine; Philippe Jacques; Gregory Kucherov
Journal:  Nucleic Acids Res       Date:  2007-10-02       Impact factor: 16.971

  6 in total

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