Literature DB >> 24977328

Biosynthesis of the 5-(Aminomethyl)-3-furanmethanol moiety of methanofuran.

Danielle Miller1, Yu Wang, Huimin Xu, Kim Harich, Robert H White.   

Abstract

We have established the biosynthetic pathway and the associated genes for the biosynthesis of the 5-(aminomethyl)-3-furanmethanol (F1) moiety of methanofuran in the methanogenic archaeon Methanocaldococcus jannaschii. The recombinant enzyme, derived from the MJ1099 gene, was shown to readily condense glyceraldehyde 3-phosphate (Ga-3P) and dihydroxyacetone-P (DHAP) to form 4-(hydroxymethyl)-2-furancarboxaldehyde phosphate (4-HFC-P). The recombinant purified pyridoxal 5'-phosphate-dependent aminotransferase, derived from the MJ0684 gene, was found to be specific for catalyzing the transamination reaction between 4-HFC-P and [(15)N]alanine to produce [(15)N] 5-(aminomethyl)-3-furanmethanol-P (F1-P) and pyruvate. To confirm these results in cell extracts, we developed sensitive analytical methods for the liquid chromatography-ultraviolet-electrospray ionization mass spectrometry analysis of F1 as a 7-nitrobenzofurazan derivative. This method has allowed for the quantitation of trace amounts of F1 and F1-P in cell extracts and the measurement of the incorporation of stable isotopically labeled precursors into F1. After incubation of cell extracts with [1,2,3-(13)C3]pyruvate and DHAP, 4-([(2)H2]hydroxymethyl)-2-furancarboxylic acid phosphate (4-HFCA-P) or 4-([(2)H2]hydroxymethyl)-2-furancarboxaldehyde phosphate (4-HFC-P) was found to be incorporated into F1-P. 4-HFCA-P and 4-HFC-P were confirmed in cell extracts after removal of the phosphate. The low level of incorporation of [1,2,3-(13)C3]pyruvate into F1-P in these experiments is explained by the fact that the labeled pyruvate must first be converted into Ga-3-P through gluconeogenesis before being incorporated into 4-HFC-P. Cell extracts incubated with 4-HFC-P and a mixture of [(15)N]aspartate, [(15)N]glutamate, and [(15)N]alanine produced [(15)N]F1-P. We also demonstrated that aqueous solutions of methylglyoxal or pyruvate heated with dihydroxyacetone led to the formation of 4-HFC and 4-HFCA, suggesting a possible prebiotic route to this moiety of methanofuran.

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Year:  2014        PMID: 24977328     DOI: 10.1021/bi500615p

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Structure of the methanofuran/methanopterin-biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii.

Authors:  Thomas A Bobik; Erick J Morales; Annie Shin; Duilio Cascio; Michael R Sawaya; Mark Arbing; Todd O Yeates; Madeline E Rasche
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-10-25       Impact factor: 1.056

2.  Identification of the Final Two Genes Functioning in Methanofuran Biosynthesis in Methanocaldococcus jannaschii.

Authors:  Yu Wang; Huimin Xu; Michael K Jones; Robert H White
Journal:  J Bacteriol       Date:  2015-06-22       Impact factor: 3.490

3.  The One-carbon Carrier Methylofuran from Methylobacterium extorquens AM1 Contains a Large Number of α- and γ-Linked Glutamic Acid Residues.

Authors:  Jethro L Hemmann; Olivier Saurel; Andrea M Ochsner; Barbara K Stodden; Patrick Kiefer; Alain Milon; Julia A Vorholt
Journal:  J Biol Chem       Date:  2016-02-19       Impact factor: 5.157

4.  S-Inosyl-L-Homocysteine Hydrolase, a Novel Enzyme Involved in S-Adenosyl-L-Methionine Recycling.

Authors:  Danielle Miller; Huimin Xu; Robert H White
Journal:  J Bacteriol       Date:  2015-04-27       Impact factor: 3.490

5.  Genome-wide gene expression and RNA half-life measurements allow predictions of regulation and metabolic behavior in Methanosarcina acetivorans.

Authors:  Joseph R Peterson; ShengShee Thor; Lars Kohler; Petra R A Kohler; William W Metcalf; Zaida Luthey-Schulten
Journal:  BMC Genomics       Date:  2016-11-16       Impact factor: 3.969

Review 6.  Genome-Scale Metabolic Modeling of Archaea Lends Insight into Diversity of Metabolic Function.

Authors:  ShengShee Thor; Joseph R Peterson; Zaida Luthey-Schulten
Journal:  Archaea       Date:  2017-01-04       Impact factor: 3.273

  6 in total

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