Literature DB >> 24968874

DSIF and NELF interact with Integrator to specify the correct post-transcriptional fate of snRNA genes.

Junichi Yamamoto1, Yuri Hagiwara1, Kunitoshi Chiba1, Tomoyasu Isobe1, Takashi Narita2, Hiroshi Handa3, Yuki Yamaguchi4.   

Abstract

The elongation factors DSIF and NELF are responsible for promoter-proximal RNA polymerase II (Pol II) pausing. NELF is also involved in 3' processing of replication-dependent histone genes, which produce non-polyadenylated mRNAs. Here we show that DSIF and NELF contribute to the synthesis of small nuclear RNAs (snRNAs) through their association with Integrator, the large multisubunit complex responsible for 3' processing of pre-snRNAs. In HeLa cells, Pol II, Integrator, DSIF and NELF accumulate at the 3' end of the U1 snRNA gene. Knockdown of NELF results in misprocessing of U1, U2, U4 and U5 snRNAs, while DSIF is required for proper transcription of these genes. Knocking down NELF also disrupts transcription termination and induces the production of polyadenylated U1 transcripts caused by an enhanced recruitment of cleavage stimulation factor. Our results indicate that NELF plays a key role in determining the post-transcriptional fate of Pol II-transcribed genes.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24968874     DOI: 10.1038/ncomms5263

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  43 in total

1.  Analysis of Subcellular RNA Fractions Revealed a Transcription-Independent Effect of Tumor Necrosis Factor Alpha on Splicing, Mediated by Spt5.

Authors:  Gil Diamant; Tal Eisenbaum; Dena Leshkowitz; Rivka Dikstein
Journal:  Mol Cell Biol       Date:  2016-04-15       Impact factor: 4.272

Review 2.  Transcription termination and the control of the transcriptome: why, where and how to stop.

Authors:  Odil Porrua; Domenico Libri
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-04       Impact factor: 94.444

Review 3.  Causes and consequences of RNA polymerase II stalling during transcript elongation.

Authors:  Melvin Noe Gonzalez; Daniel Blears; Jesper Q Svejstrup
Journal:  Nat Rev Mol Cell Biol       Date:  2020-11-18       Impact factor: 94.444

Review 4.  The Integrator Complex in Transcription and Development.

Authors:  María Saraí Mendoza-Figueroa; Deirdre C Tatomer; Jeremy E Wilusz
Journal:  Trends Biochem Sci       Date:  2020-08-13       Impact factor: 13.807

5.  Alternative splicing of DSP1 enhances snRNA accumulation by promoting transcription termination and recycle of the processing complex.

Authors:  Weili Wang; Xuepiao Pu; Siyu Yang; Yujie Feng; Chan Lin; Mu Li; Xi Li; Huali Li; Chunmei Meng; Qingjun Xie; Bin Yu; Yunfeng Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

6.  Ssb1 and Ssb2 cooperate to regulate mouse hematopoietic stem and progenitor cells by resolving replicative stress.

Authors:  Wei Shi; Therese Vu; Didier Boucher; Anna Biernacka; Jules Nde; Raj K Pandita; Jasmin Straube; Glen M Boyle; Fares Al-Ejeh; Purba Nag; Jessie Jeffery; Janelle L Harris; Amanda L Bain; Marta Grzelak; Magdalena Skrzypczak; Abhishek Mitra; Norbert Dojer; Nicola Crosetto; Nicole Cloonan; Olivier J Becherel; John Finnie; Jeffrey R Skaar; Carl R Walkley; Tej K Pandita; Maga Rowicka; Krzysztof Ginalski; Steven W Lane; Kum Kum Khanna
Journal:  Blood       Date:  2017-03-07       Impact factor: 22.113

7.  Spt5 Plays Vital Roles in the Control of Sense and Antisense Transcription Elongation.

Authors:  Ameet Shetty; Scott P Kallgren; Carina Demel; Kerstin C Maier; Dan Spatt; Burak H Alver; Patrick Cramer; Peter J Park; Fred Winston
Journal:  Mol Cell       Date:  2017-03-30       Impact factor: 17.970

8.  The Integrator Complex Attenuates Promoter-Proximal Transcription at Protein-Coding Genes.

Authors:  Nathan D Elrod; Telmo Henriques; Kai-Lieh Huang; Deirdre C Tatomer; Jeremy E Wilusz; Eric J Wagner; Karen Adelman
Journal:  Mol Cell       Date:  2019-12-05       Impact factor: 17.970

9.  Characterization of the Human Transcription Elongation Factor Rtf1: Evidence for Nonoverlapping Functions of Rtf1 and the Paf1 Complex.

Authors:  Qing-Fu Cao; Junichi Yamamoto; Tomoyasu Isobe; Shumpei Tateno; Yuki Murase; Yexi Chen; Hiroshi Handa; Yuki Yamaguchi
Journal:  Mol Cell Biol       Date:  2015-07-27       Impact factor: 4.272

10.  NELF Regulates a Promoter-Proximal Step Distinct from RNA Pol II Pause-Release.

Authors:  Yuki Aoi; Edwin R Smith; Avani P Shah; Emily J Rendleman; Stacy A Marshall; Ashley R Woodfin; Fei X Chen; Ramin Shiekhattar; Ali Shilatifard
Journal:  Mol Cell       Date:  2020-03-09       Impact factor: 17.970

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.