Literature DB >> 24962244

In a glycosylation reaction how does a hydroxylic nucleophile find the activated anomeric carbon?

Dennis M Whitfield1.   

Abstract

The mechanism by which nucleophilic hydroxyls are attracted to activated glycopyranosyl donors is not known. Besides the intrinsic attraction of oxygen centred negative dipoles towards the developing electron deficiency at the anomeric carbon only a few suggestions have been given in the literature. By studying the effect on Density Functional Theory (DFT) modelled glycosylation reactions on the presence of polar additives as tested with acetonitrile two possible effects have been identified. One was noted in a previous publication (Carbohydr. Res.2012, 356, 180-190) and two further examples discovered here that suggest that a lone pair of a nucleophile approaching a donor with a β-leaving group from the α-face can act as the antiperiplanar lone pair that assists leaving group departure. This interaction starts at just under a nucleophile C-1 separation of 3Å and has an incipient bond angle of O-5-C-1-Nuc(O or N) of very close to 90° which can be at C-1 with the p-type orbital at C-1-O-5 of the incipient oxacarbenium ion, that is, the LUMO of the activated donor. The 2nd interaction is less well studied and is suggested to be a similar bonding interaction which moves β-face nucleophiles to O-Nuc-C-1-leaving groups angles close to 180°. Crown
Copyright © 2014. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Antiperiplanar lone pair hypotheses; Glycosylation; Nucleophile; Oxacarbenium ion; Solvation

Mesh:

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Year:  2014        PMID: 24962244     DOI: 10.1016/j.carres.2014.05.021

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  3 in total

Review 1.  The Experimental Evidence in Support of Glycosylation Mechanisms at the SN1-SN2 Interface.

Authors:  Philip Ouma Adero; Harsha Amarasekara; Peng Wen; Luis Bohé; David Crich
Journal:  Chem Rev       Date:  2018-05-30       Impact factor: 60.622

2.  Mechanism of Glycosylation of Anomeric Sulfonium Ions.

Authors:  Tao Fang; Yi Gu; Wei Huang; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2016-02-29       Impact factor: 15.419

3.  Glycosyl Oxocarbenium Ions: Structure, Conformation, Reactivity, and Interactions.

Authors:  Antonio Franconetti; Ana Ardá; Juan Luis Asensio; Yves Blériot; Sébastien Thibaudeau; Jesús Jiménez-Barbero
Journal:  Acc Chem Res       Date:  2021-04-30       Impact factor: 22.384

  3 in total

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