Literature DB >> 24958170

PRIME-XS, a European infrastructure for proteomics.

Reinout Raijmakers1, Jesper V Olsen2, Ruedi Aebersold3, Albert J R Heck4.   

Abstract

The PRIME-XS consortium is a pan-European infrastructure for proteomics. As a prologue to this special issue of Molecular & Cellular Proteomics on the research activities of the PRIME-XS consortium, we, as the guest editors of this issue, provide an overview of the structure and activities of this consortium, which is funded by the European Union's 7th Framework Programme for Research and Technological Development.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2014        PMID: 24958170      PMCID: PMC4125724          DOI: 10.1074/mcp.E114.040162

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  7 in total

Review 1.  Next-generation proteomics: towards an integrative view of proteome dynamics.

Authors:  A F Maarten Altelaar; Javier Munoz; Albert J R Heck
Journal:  Nat Rev Genet       Date:  2012-12-04       Impact factor: 53.242

2.  Lysine succinylation is a frequently occurring modification in prokaryotes and eukaryotes and extensively overlaps with acetylation.

Authors:  Brian T Weinert; Christian Schölz; Sebastian A Wagner; Vytautas Iesmantavicius; Dan Su; Jeremy A Daniel; Chunaram Choudhary
Journal:  Cell Rep       Date:  2013-08-15       Impact factor: 9.423

3.  Proteome-derived peptide libraries to study the substrate specificity profiles of carboxypeptidases.

Authors:  Sebastian Tanco; Julia Lorenzo; Javier Garcia-Pardo; Sven Degroeve; Lennart Martens; Francesc Xavier Aviles; Kris Gevaert; Petra Van Damme
Journal:  Mol Cell Proteomics       Date:  2013-04-25       Impact factor: 5.911

4.  Quantitative and qualitative proteome characteristics extracted from in-depth integrated genomics and proteomics analysis.

Authors:  Teck Yew Low; Sebastiaan van Heesch; Henk van den Toorn; Piero Giansanti; Alba Cristobal; Pim Toonen; Sebastian Schafer; Norbert Hübner; Bas van Breukelen; Shabaz Mohammed; Edwin Cuppen; Albert J R Heck; Victor Guryev
Journal:  Cell Rep       Date:  2013-11-27       Impact factor: 9.423

5.  N-glycoprotein SRMAtlas: a resource of mass spectrometric assays for N-glycosites enabling consistent and multiplexed protein quantification for clinical applications.

Authors:  Ruth Hüttenhain; Silvia Surinova; Reto Ossola; Zhi Sun; David Campbell; Ferdinando Cerciello; Ralph Schiess; Damaris Bausch-Fluck; George Rosenberger; Jingchung Chen; Oliver Rinner; Ulrike Kusebauch; Marián Hajdúch; Robert L Moritz; Bernd Wollscheid; Ruedi Aebersold
Journal:  Mol Cell Proteomics       Date:  2013-02-13       Impact factor: 5.911

6.  A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.

Authors:  Sebastian A Wagner; Petra Beli; Brian T Weinert; Michael L Nielsen; Jürgen Cox; Matthias Mann; Chunaram Choudhary
Journal:  Mol Cell Proteomics       Date:  2011-09-01       Impact factor: 5.911

7.  The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013.

Authors:  Juan Antonio Vizcaíno; Richard G Côté; Attila Csordas; José A Dianes; Antonio Fabregat; Joseph M Foster; Johannes Griss; Emanuele Alpi; Melih Birim; Javier Contell; Gavin O'Kelly; Andreas Schoenegger; David Ovelleiro; Yasset Pérez-Riverol; Florian Reisinger; Daniel Ríos; Rui Wang; Henning Hermjakob
Journal:  Nucleic Acids Res       Date:  2012-11-29       Impact factor: 16.971

  7 in total
  1 in total

1.  In-depth analysis of Bacillus subtilis proteome identifies new ORFs and traces the evolutionary history of modified proteins.

Authors:  Vaishnavi Ravikumar; Nicolas C Nalpas; Viktoria Anselm; Karsten Krug; Maša Lenuzzi; Martin Sebastijan Šestak; Tomislav Domazet-Lošo; Ivan Mijakovic; Boris Macek
Journal:  Sci Rep       Date:  2018-11-22       Impact factor: 4.379

  1 in total

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