Literature DB >> 24956459

Resonance Raman spectroscopy on [NiFe] hydrogenase provides structural insights into catalytic intermediates and reactions.

Marius Horch1, Janna Schoknecht, Maria Andrea Mroginski, Oliver Lenz, Peter Hildebrandt, Ingo Zebger.   

Abstract

[NiFe] hydrogenases catalyze the reversible cleavage of hydrogen and, thus, represent model systems for the investigation and exploitation of emission-free energy conversion processes. Valuable information on the underlying molecular mechanisms can be obtained by spectroscopic techniques that monitor individual catalytic intermediates. Here, we employed resonance Raman spectroscopy and extended it to the entire binuclear active site of an oxygen-tolerant [NiFe] hydrogenase by probing the metal-ligand modes of both the Fe and, for the first time, the Ni ion. Supported by theoretical methods, this approach allowed for monitoring H-transfer from the active site and revealed novel insights into the so far unknown structure and electronic configuration of the hydrogen-binding intermediate of the catalytic cycle, thereby providing key information about catalytic intermediates and reactions of biological hydrogen activation.

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Year:  2014        PMID: 24956459     DOI: 10.1021/ja505119q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  17 in total

1.  Experimental and DFT Investigations Reveal the Influence of the Outer Coordination Sphere on the Vibrational Spectra of Nickel-Substituted Rubredoxin, a Model Hydrogenase Enzyme.

Authors:  Jeffrey W Slater; Sean C Marguet; Sabrina L Cirino; Pearson T Maugeri; Hannah S Shafaat
Journal:  Inorg Chem       Date:  2017-03-21       Impact factor: 5.165

Review 2.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

3.  Metagenomic Sequencing Unravels Gene Fragments with Phylogenetic Signatures of O2-Tolerant NiFe Membrane-Bound Hydrogenases in Lacustrine Sediment.

Authors:  Jillian M Couto; Umer Zeeshan Ijaz; Vernon R Phoenix; Melanie Schirmer; William T Sloan
Journal:  Curr Microbiol       Date:  2015-06-05       Impact factor: 2.188

4.  Nuclear resonance vibrational spectroscopy reveals the FeS cluster composition and active site vibrational properties of an O2-tolerant NAD+-reducing [NiFe] hydrogenase.

Authors:  Lars Lauterbach; Hongxin Wang; Marius Horch; Leland B Gee; Yoshitaka Yoda; Yoshihito Tanaka; Ingo Zebger; Oliver Lenz; Stephen P Cramer
Journal:  Chem Sci       Date:  2015       Impact factor: 9.825

5.  Cofactor composition and function of a H2-sensing regulatory hydrogenase as revealed by Mössbauer and EPR spectroscopy.

Authors:  Federico Roncaroli; Eckhard Bill; Bärbel Friedrich; Oliver Lenz; Wolfgang Lubitz; Maria-Eirini Pandelia
Journal:  Chem Sci       Date:  2015-05-26       Impact factor: 9.825

6.  Vibrational spectroscopy reveals the initial steps of biological hydrogen evolution.

Authors:  S Katz; J Noth; M Horch; H S Shafaat; T Happe; P Hildebrandt; I Zebger
Journal:  Chem Sci       Date:  2016-07-11       Impact factor: 9.825

Review 7.  Proton Transfer in the Catalytic Cycle of [NiFe] Hydrogenases: Insight from Vibrational Spectroscopy.

Authors:  Philip A Ash; Ricardo Hidalgo; Kylie A Vincent
Journal:  ACS Catal       Date:  2017-02-23       Impact factor: 13.084

8.  Hydroxy-bridged resting states of a [NiFe]-hydrogenase unraveled by cryogenic vibrational spectroscopy and DFT computations.

Authors:  Giorgio Caserta; Vladimir Pelmenschikov; Christian Lorent; Armel F Tadjoung Waffo; Sagie Katz; Lars Lauterbach; Janna Schoknecht; Hongxin Wang; Yoshitaka Yoda; Kenji Tamasaku; Martin Kaupp; Peter Hildebrandt; Oliver Lenz; Stephen P Cramer; Ingo Zebger
Journal:  Chem Sci       Date:  2020-12-11       Impact factor: 9.825

9.  Optimization of Culture Conditions for Oxygen-Tolerant Regulatory [NiFe]-Hydrogenase Production from Ralstonia eutropha H16 in Escherichia coli.

Authors:  Qin Fan; Giorgio Caserta; Christian Lorent; Oliver Lenz; Peter Neubauer; Matthias Gimpel
Journal:  Microorganisms       Date:  2021-05-31

10.  Efficient long-range conduction in cable bacteria through nickel protein wires.

Authors:  Henricus T S Boschker; Perran L M Cook; Lubos Polerecky; Raghavendran Thiruvallur Eachambadi; Helena Lozano; Silvia Hidalgo-Martinez; Dmitry Khalenkow; Valentina Spampinato; Nathalie Claes; Paromita Kundu; Da Wang; Sara Bals; Karina K Sand; Francesca Cavezza; Tom Hauffman; Jesper Tataru Bjerg; Andre G Skirtach; Kamila Kochan; Merrilyn McKee; Bayden Wood; Diana Bedolla; Alessandra Gianoncelli; Nicole M J Geerlings; Nani Van Gerven; Han Remaut; Jeanine S Geelhoed; Ruben Millan-Solsona; Laura Fumagalli; Lars Peter Nielsen; Alexis Franquet; Jean V Manca; Gabriel Gomila; Filip J R Meysman
Journal:  Nat Commun       Date:  2021-06-28       Impact factor: 14.919

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