Literature DB >> 24956405

Paramagnetic decoration of DNA origami nanostructures by Eu³⁺ coordination.

Lars Opherden1, Jana Oertel, Astrid Barkleit, Karim Fahmy, Adrian Keller.   

Abstract

The folding of DNA into arbitrary two- and three-dimensional shapes, called DNA origami, represents a powerful tool for the synthesis of functional nanostructures. Here, we present the first approach toward the paramagnetic functionalization of DNA origami nanostructures by utilizing postassembly coordination with Eu(3+) ions. In contrast to the usual formation of toroidal dsDNA condensates in the presence of trivalent cations, planar as well as rod-like DNA origami maintain their shape and monomeric state even under high loading with the trivalent lanthanide. Europium coordination was demonstrated by the change in Eu(3+) luminescence upon binding to the two DNA origami. Their natural circular dichroism in the Mg(2+)- and Eu(3+)-bound state was found to be very similar to that of genomic DNA, evidencing little influence of the DNA origami superstructure on the local chirality of the stacked base pairs. In contrast, the magnetic circular dichroism of the Mg(2+)-bound DNA origami deviates from that of genomic DNA. Furthermore, the lanthanide affects the magnetic properties of DNA in a superstructure-dependent fashion, indicative of the existence of superstructure-specific geometry of Eu(3+) binding sites in the DNA origami that are not formed in genomic DNA. This simple approach lays the foundation for the generation of magneto-responsive DNA origami nanostructures. Such systems do not require covalent modifications and can be used for the magnetic manipulation of DNA nanostructures or for the paramagnetic alignment of molecules in NMR spectroscopy.

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Year:  2014        PMID: 24956405     DOI: 10.1021/la501112a

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  4 in total

1.  DNA-melamine hybrid molecules: from self-assembly to nanostructures.

Authors:  Rina Kumari; Shib Shankar Banerjee; Anil K Bhowmick; Prolay Das
Journal:  Beilstein J Nanotechnol       Date:  2015-06-30       Impact factor: 3.649

2.  Salting-Out of DNA Origami Nanostructures by Ammonium Sulfate.

Authors:  Marcel Hanke; Niklas Hansen; Ruiping Chen; Guido Grundmeier; Karim Fahmy; Adrian Keller
Journal:  Int J Mol Sci       Date:  2022-03-04       Impact factor: 5.923

3.  Time-Dependent DNA Origami Denaturation by Guanidinium Chloride, Guanidinium Sulfate, and Guanidinium Thiocyanate.

Authors:  Marcel Hanke; Niklas Hansen; Emilia Tomm; Guido Grundmeier; Adrian Keller
Journal:  Int J Mol Sci       Date:  2022-08-01       Impact factor: 6.208

Review 4.  Structural stability of DNA origami nanostructures under application-specific conditions.

Authors:  Saminathan Ramakrishnan; Heini Ijäs; Veikko Linko; Adrian Keller
Journal:  Comput Struct Biotechnol J       Date:  2018-09-18       Impact factor: 7.271

  4 in total

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