Literature DB >> 24954405

Modelling the root system architecture of Poaceae. Can we simulate integrated traits from morphological parameters of growth and branching?

Loïc Pagès1, Catherine Picon-Cochard2.   

Abstract

Our objective was to calibrate a model of the root system architecture on several Poaceae species and to assess its value to simulate several 'integrated' traits measured at the root system level: specific root length (SRL), maximum root depth and root mass. We used the model ArchiSimple, made up of sub-models that represent and combine the basic developmental processes, and an experiment on 13 perennial grassland Poaceae species grown in 1.5-m-deep containers and sampled at two different dates after planting (80 and 120 d). Model parameters were estimated almost independently using small samples of the root systems taken at both dates. The relationships obtained for calibration validated the sub-models, and showed species effects on the parameter values. The simulations of integrated traits were relatively correct for SRL and were good for root depth and root mass at the two dates. We obtained some systematic discrepancies that were related to the slight decline of root growth in the last period of the experiment. Because the model allowed correct predictions on a large set of Poaceae species without global fitting, we consider that it is a suitable tool for linking root traits at different organisation levels.
© 2014 INRA. New Phytologist © 2014 New Phytologist Trust.

Keywords:  Poaceae; branching; growth; model; root system architecture; root trait; specific root length (SRL)

Mesh:

Year:  2014        PMID: 24954405     DOI: 10.1111/nph.12904

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  9 in total

1.  Branching patterns of root systems: comparison of monocotyledonous and dicotyledonous species.

Authors:  Loïc Pagès
Journal:  Ann Bot       Date:  2016-09-15       Impact factor: 4.357

2.  Seeking stable traits to characterize the root system architecture. Study on 60 species located at two sites in natura.

Authors:  Loïc Pagès; Jocelyne Kervella
Journal:  Ann Bot       Date:  2018-06-28       Impact factor: 4.357

Review 3.  A starting guide to root ecology: strengthening ecological concepts and standardising root classification, sampling, processing and trait measurements.

Authors:  Grégoire T Freschet; Loïc Pagès; Colleen M Iversen; Louise H Comas; Boris Rewald; Catherine Roumet; Jitka Klimešová; Marcin Zadworny; Hendrik Poorter; Johannes A Postma; Thomas S Adams; Agnieszka Bagniewska-Zadworna; A Glyn Bengough; Elison B Blancaflor; Ivano Brunner; Johannes H C Cornelissen; Eric Garnier; Arthur Gessler; Sarah E Hobbie; Ina C Meier; Liesje Mommer; Catherine Picon-Cochard; Laura Rose; Peter Ryser; Michael Scherer-Lorenzen; Nadejda A Soudzilovskaia; Alexia Stokes; Tao Sun; Oscar J Valverde-Barrantes; Monique Weemstra; Alexandra Weigelt; Nina Wurzburger; Larry M York; Sarah A Batterman; Moemy Gomes de Moraes; Štěpán Janeček; Hans Lambers; Verity Salmon; Nishanth Tharayil; M Luke McCormack
Journal:  New Phytol       Date:  2021-11       Impact factor: 10.323

Review 4.  Roots Withstanding their Environment: Exploiting Root System Architecture Responses to Abiotic Stress to Improve Crop Tolerance.

Authors:  Iko T Koevoets; Jan Henk Venema; J Theo M Elzenga; Christa Testerink
Journal:  Front Plant Sci       Date:  2016-08-31       Impact factor: 5.753

5.  An Explicit Structural Model of Root Hair and Soil Interactions Parameterised by Synchrotron X-ray Computed Tomography.

Authors:  Samuel David Keyes; Konstantinos C Zygalakis; Tiina Roose
Journal:  Bull Math Biol       Date:  2017-10-13       Impact factor: 1.758

6.  Analysis and Modeling of the Variations of Root Branching Density Within Individual Plants and Among Species.

Authors:  Loïc Pagès
Journal:  Front Plant Sci       Date:  2019-08-08       Impact factor: 5.753

7.  The resilience of perennial grasses under two climate scenarios is correlated with carbohydrate metabolism in meristems.

Authors:  Florence Volaire; Annette Morvan-Bertrand; Marie-Pascale Prud'homme; Marie-Lise Benot; Angela Augusti; Marine Zwicke; Jacques Roy; Damien Landais; Catherine Picon-Cochard
Journal:  J Exp Bot       Date:  2020-01-01       Impact factor: 6.992

8.  Quantifying the effect of crop spatial arrangement on weed suppression using functional-structural plant modelling.

Authors:  Jochem B Evers; Lammert Bastiaans
Journal:  J Plant Res       Date:  2016-03-21       Impact factor: 2.629

9.  Phenotyping Root Systems in a Set of Japonica Rice Accessions: Can Structural Traits Predict the Response to Drought?

Authors:  Paulo Henrique Ramos Guimarães; Isabela Pereira de Lima; Adriano Pereira de Castro; Anna Cristina Lanna; Patrícia Guimarães Santos Melo; Marcel de Raïssac
Journal:  Rice (N Y)       Date:  2020-09-15       Impact factor: 4.783

  9 in total

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