Literature DB >> 24954187

Computer-aided drug discovery approach finds calcium sensitizer of cardiac troponin.

Steffen Lindert1, Monica X Li, Brian D Sykes, J Andrew McCammon.   

Abstract

In the fight against heart failure, therapeutics that have the ability to increase the contractile power of the heart are urgently needed. One possible route of action to improve heart contractile power is increasing the calcium sensitivity of the thin filament. From a pharmaceutical standpoint, calcium sensitizers have the distinct advantage of not altering cardiomyocyte calcium levels and thus have lower potential for side-effects. Small chemical molecules have been shown to bind to the interface between cTnC and the cTnI switch peptide and exhibit calcium-sensitizing properties, possibly by stabilizing cTnC in an open conformation. Building on existing structural data of a known calcium sensitizer bound to cardiac troponin, we combined computational structure-based virtual screening drug discovery methods and solution NMR titration assays to identify a novel calcium sensitizer 4-(4-(2,5-dimethylphenyl)-1-piperazinyl)-3-pyridinamine (NSC147866) which binds to cTnC and the cTnC-cTnI147-163 complex. Its presence increases the affinity of switch peptide to cTnC by approximately a factor of two. This action is comparable to that of known levosimendan analogues.
© 2014 John Wiley & Sons A/S.

Entities:  

Keywords:  NMR spectroscopy; drug discovery; molecular modeling

Mesh:

Substances:

Year:  2014        PMID: 24954187      PMCID: PMC4456024          DOI: 10.1111/cbdd.12381

Source DB:  PubMed          Journal:  Chem Biol Drug Des        ISSN: 1747-0277            Impact factor:   2.817


  32 in total

Review 1.  Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings.

Authors:  C A Lipinski; F Lombardo; B W Dominy; P J Feeney
Journal:  Adv Drug Deliv Rev       Date:  2001-03-01       Impact factor: 15.470

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Authors:  Richard A Friesner; Robert B Murphy; Matthew P Repasky; Leah L Frye; Jeremy R Greenwood; Thomas A Halgren; Paul C Sanschagrin; Daniel T Mainz
Journal:  J Med Chem       Date:  2006-10-19       Impact factor: 7.446

3.  Cardiac myosin activation: a potential therapeutic approach for systolic heart failure.

Authors:  Fady I Malik; James J Hartman; Kathleen A Elias; Bradley P Morgan; Hector Rodriguez; Katjusa Brejc; Robert L Anderson; Sandra H Sueoka; Kenneth H Lee; Jeffrey T Finer; Roman Sakowicz; Ramesh Baliga; David R Cox; Marc Garard; Guillermo Godinez; Raja Kawas; Erica Kraynack; David Lenzi; Pu Ping Lu; Alexander Muci; Congrong Niu; Xiangping Qian; Daniel W Pierce; Maria Pokrovskii; Ion Suehiro; Sheila Sylvester; Todd Tochimoto; Corey Valdez; Wenyue Wang; Tatsuo Katori; David A Kass; You-Tang Shen; Stephen F Vatner; David J Morgans
Journal:  Science       Date:  2011-03-18       Impact factor: 47.728

4.  Ranolazine improves cardiac diastolic dysfunction through modulation of myofilament calcium sensitivity.

Authors:  Joshua D Lovelock; Michelle M Monasky; Euy-Myoung Jeong; Harvey A Lardin; Hong Liu; Bindiya G Patel; Domenico M Taglieri; Lianzhi Gu; Praveen Kumar; Narayan Pokhrel; Dewan Zeng; Luiz Belardinelli; Dan Sorescu; R John Solaro; Samuel C Dudley
Journal:  Circ Res       Date:  2012-02-16       Impact factor: 17.367

5.  A structural and functional perspective into the mechanism of Ca2+-sensitizers that target the cardiac troponin complex.

Authors:  Ian M Robertson; Yin-Biao Sun; Monica X Li; Brian D Sykes
Journal:  J Mol Cell Cardiol       Date:  2010-08-27       Impact factor: 5.000

6.  Binding of a new Ca2+ sensitizer, levosimendan, to recombinant human cardiac troponin C. A molecular modelling, fluorescence probe, and proton nuclear magnetic resonance study.

Authors:  P Pollesello; M Ovaska; J Kaivola; C Tilgmann; K Lundström; N Kalkkinen; I Ulmanen; E Nissinen; J Taskinen
Journal:  J Biol Chem       Date:  1994-11-18       Impact factor: 5.157

7.  Kinetic studies of calcium and cardiac troponin I peptide binding to human cardiac troponin C using NMR spectroscopy.

Authors:  Monica X Li; Erik J Saude; Xu Wang; Joyce R Pearlstone; Lawrence B Smillie; Brian D Sykes
Journal:  Eur Biophys J       Date:  2002-06-06       Impact factor: 1.733

8.  Cardiac troponin C as a target protein for a novel calcium sensitizing drug, levosimendan.

Authors:  H Haikala; J Kaivola; E Nissinen; P Wall; J Levijoki; I B Lindén
Journal:  J Mol Cell Cardiol       Date:  1995-09       Impact factor: 5.000

9.  Troponin C-mediated calcium sensitization induced by levosimendan does not impair relaxation.

Authors:  H Haikala; E Nissinen; E Etemadzadeh; J Levijoki; I B Lindén
Journal:  J Cardiovasc Pharmacol       Date:  1995-05       Impact factor: 3.105

10.  Increase by trifluoperazine in calcium sensitivity of myofibrils in a skinned fibre from frog skeletal muscle.

Authors:  N Kurebayashi; Y Ogawa
Journal:  J Physiol       Date:  1988-09       Impact factor: 5.182

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  13 in total

1.  Discovery of Novel Small-Molecule Calcium Sensitizers for Cardiac Troponin C: A Combined Virtual and Experimental Screening Approach.

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2.  Influence of gauche effect on uncharged oxime reactivators for the reactivation of tabun-inhibited AChE: quantum chemical and steered molecular dynamics studies.

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Journal:  J Comput Aided Mol Des       Date:  2018-07-06       Impact factor: 3.686

3.  Successful Identification of Cardiac Troponin Calcium Sensitizers Using a Combination of Virtual Screening and ROC Analysis of Known Troponin C Binders.

Authors:  Melanie L Aprahamian; Svetlana B Tikunova; Morgan V Price; Andres F Cuesta; Jonathan P Davis; Steffen Lindert
Journal:  J Chem Inf Model       Date:  2017-11-16       Impact factor: 4.956

4.  Mechanism of Cardiac Troponin C Calcium Sensitivity Modulation by Small Molecules Illuminated by Umbrella Sampling Simulations.

Authors:  Jacob D Bowman; William H Coldren; Steffen Lindert
Journal:  J Chem Inf Model       Date:  2019-05-29       Impact factor: 4.956

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6.  Molecular Dynamics and Umbrella Sampling Simulations Elucidate Differences in Troponin C Isoform and Mutant Hydrophobic Patch Exposure.

Authors:  Jacob D Bowman; Steffen Lindert
Journal:  J Phys Chem B       Date:  2018-08-02       Impact factor: 2.991

Review 7.  Structure and function of cardiac troponin C (TNNC1): Implications for heart failure, cardiomyopathies, and troponin modulating drugs.

Authors:  Monica X Li; Peter M Hwang
Journal:  Gene       Date:  2015-07-29       Impact factor: 3.688

8.  Identification of Novel Cyclin A2 Binding Site and Nanomolar Inhibitors of Cyclin A2-CDK2 Complex.

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Review 9.  Levosimendan Efficacy and Safety: 20 Years of SIMDAX in Clinical Use.

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Journal:  J Cardiovasc Pharmacol       Date:  2020-07       Impact factor: 3.105

10.  Molecular dynamics provides new insights into the mechanism of calcium signal transduction and interdomain interactions in cardiac troponin.

Authors:  Georgi Z Genchev; Minae Kobayashi; Tomoyoshi Kobayashi; Hui Lu
Journal:  FEBS Open Bio       Date:  2021-06-09       Impact factor: 2.693

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