Literature DB >> 24953220

A hydro-kinetic scheme for the dynamics of hydrogen bonds in water-like fluids.

Nasrollah Moradi1, Andreas Greiner, Simone Melchionna, Francesco Rao, Sauro Succi.   

Abstract

A hydro-kinetic scheme for water-like fluids, based on a lattice version of the Boltzmann equation, is presented and applied to the popular TIP3P model of liquid water. By proceeding in much larger steps than molecular dynamics, the scheme proves to be very effective in attaining global minima of classical pair potentials with directional and radial interactions, as confirmed by further simulations using the three-dimensional Ben-Naim water potential. The scheme is shown to reproduce the propensity of water to form nearly four hydrogen bonds per molecule, as well as their statistical distribution in the presence of thermal fluctuations, at a linear cost of computational time with the system size.

Entities:  

Year:  2014        PMID: 24953220     DOI: 10.1039/c4cp00921e

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  2 in total

1.  A new mathematical model to explore microbial processes and their constraints in phytoplankton colonies and sinking marine aggregates.

Authors:  Nasrollah Moradi; Bo Liu; Morten Iversen; Marcel M Kuypers; Helle Ploug; Arzhang Khalili
Journal:  Sci Adv       Date:  2018-10-31       Impact factor: 14.136

2.  Protein Simulations in Fluids: Coupling the OPEP Coarse-Grained Force Field with Hydrodynamics.

Authors:  Fabio Sterpone; Philippe Derreumaux; Simone Melchionna
Journal:  J Chem Theory Comput       Date:  2015-04-14       Impact factor: 6.006

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.