Literature DB >> 24944100

The 100S ribosome: ribosomal hibernation induced by stress.

Hideji Yoshida1, Akira Wada.   

Abstract

One of the most important cellular events in all organisms is protein synthesis (translation), which is catalyzed by ribosomes. The regulation of translational activity is dependent on the environmental situation of the cell. A decrease in overall translation under stress conditions is mainly accompanied by the formation of functionally inactive 100S ribosomes in bacteria. The 100S ribosome is a dimer of two 70S ribosomes that is formed through interactions between their 30S subunits. Two mechanisms of 100S ribosome formation are known: one involving ribosome modulation factor (RMF) and short hibernation promoting factor (HPF) in a part of Gammaproteobacteria including Escherichia coli, and the other involving only long HPF in the majority of bacteria. The expression of RMF is regulated by ppGpp and cyclic AMP-cAMP receptor protein (cAMP-CRP) induced by amino acid starvation and glucose depletion, respectively. When stress conditions are removed, the 100S ribosome immediately dissociates into the active 70S ribosomes by releasing RMF. The stage in the ribosome cycle at which the ribosome loses translational activity is referred to as 'Hibernation'. The lifetime of cells that cannot form 100S ribosomes by deletion of the rmf gene is shorter than that of parental cells under stress conditions in E. coli. This fact indicates that the interconversion system between active 70S ribosomes and inactive 100S ribosomes is an important survival strategy for bacteria.
© 2014 John Wiley & Sons, Ltd.

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Year:  2014        PMID: 24944100     DOI: 10.1002/wrna.1242

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  35 in total

1.  Long-term survival of Borrelia burgdorferi lacking the hibernation promotion factor homolog in the unfed tick vector.

Authors:  Lisa Fazzino; Kit Tilly; Daniel P Dulebohn; Patricia A Rosa
Journal:  Infect Immun       Date:  2015-10-05       Impact factor: 3.441

2.  Heterogeneity of Stop Codon Readthrough in Single Bacterial Cells and Implications for Population Fitness.

Authors:  Yongqiang Fan; Christopher R Evans; Karl W Barber; Kinshuk Banerjee; Kalyn J Weiss; William Margolin; Oleg A Igoshin; Jesse Rinehart; Jiqiang Ling
Journal:  Mol Cell       Date:  2017-08-03       Impact factor: 17.970

3.  Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.

Authors:  Bertrand Beckert; Maha Abdelshahid; Heinrich Schäfer; Wieland Steinchen; Stefan Arenz; Otto Berninghausen; Roland Beckmann; Gert Bange; Kürşad Turgay; Daniel N Wilson
Journal:  EMBO J       Date:  2017-05-03       Impact factor: 11.598

4.  Interpretation of anomalously long crosslinks in ribosome crosslinking reveals the ribosome interaction in stationary phase E. coli.

Authors:  Santosh A Misal; Bingqing Zhao; James P Reilly
Journal:  RSC Chem Biol       Date:  2022-05-16

5.  Stationary-phase genes upregulated by polyamines are responsible for the formation of Escherichia coli persister cells tolerant to netilmicin.

Authors:  Alexander G Tkachenko; Natalya M Kashevarova; Elena A Tyuleneva; Mikhail S Shumkov
Journal:  FEMS Microbiol Lett       Date:  2017-05-01       Impact factor: 2.742

6.  Ribosome hibernation facilitates tolerance of stationary-phase bacteria to aminoglycosides.

Authors:  Susannah L McKay; Daniel A Portnoy
Journal:  Antimicrob Agents Chemother       Date:  2015-08-31       Impact factor: 5.191

7.  Disassembly of the Staphylococcus aureus hibernating 100S ribosome by an evolutionarily conserved GTPase.

Authors:  Arnab Basu; Mee-Ngan F Yap
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-11       Impact factor: 11.205

Review 8.  In Vitro Studies of Persister Cells.

Authors:  Niilo Kaldalu; Vasili Hauryliuk; Kathryn Jane Turnbull; Agnese La Mensa; Marta Putrinš; Tanel Tenson
Journal:  Microbiol Mol Biol Rev       Date:  2020-11-11       Impact factor: 11.056

9.  Ribosome hibernation factor promotes Staphylococcal survival and differentially represses translation.

Authors:  Arnab Basu; Mee-Ngan F Yap
Journal:  Nucleic Acids Res       Date:  2016-03-21       Impact factor: 16.971

10.  Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF.

Authors:  Iskander Khusainov; Quentin Vicens; Rustam Ayupov; Konstantin Usachev; Alexander Myasnikov; Angelita Simonetti; Shamil Validov; Bruno Kieffer; Gulnara Yusupova; Marat Yusupov; Yaser Hashem
Journal:  EMBO J       Date:  2017-06-23       Impact factor: 11.598

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