Literature DB >> 24943725

Deep-sequencing analysis of the gene encoding the hepatitis C virus nonstructural 3-4A protease confirms a low prevalence of telaprevir-resistant variants at baseline and the end of the REALIZE study.

Inge Dierynck1, Kim Thys1, Anne Ghys1, James C Sullivan2, Tara L Kieffer2, Jeroen Aerssens1, Gaston Picchio3, Sandra De Meyer1.   

Abstract

BACKGROUND: Population sequencing (PS) has shown that telaprevir-resistant variants are not typically detectable at baseline (prevalence, ≤5% of patients), and most variants present at the time of treatment failure are no longer detectable at the end of the study.
METHODS: To gain insight into the evolution of telaprevir-resistant variants, their baseline prevalence and persistence after treatment was investigated using a more sensitive, deep-sequencing (DS) technique in a large number of treatment-experienced patients from the REALIZE study who were infected with hepatitis C virus genotype 1.
RESULTS: Before treatment initiation, telaprevir-resistant variants (T54A, T54S, or R155K in 1%-2% of the viral population) were detected by DS in a fraction (2%) of patients for whom PS failed to detect resistance; these variants were not necessarily detected at the time of treatment failure. Of 49 patients in whom telaprevir-resistant variants were detected by PS at the time of treatment failure but not at the end of the study, DS revealed the presence of variants (V36A/L/M, T54S, or R155K in 1%-36% of the viral population) in 16 patients (33%) at the end of the study.
CONCLUSIONS: Similar to PS findings, DS analysis revealed that the frequency of telaprevir-resistant variants before treatment was also low, and variants detected at the time of treatment failure were no longer detectable in the majority of patients during follow-up.
© The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Genotype 1; HCV; deep sequencing technique; mutation; population sequencing; resistance; telaprevir

Mesh:

Substances:

Year:  2014        PMID: 24943725     DOI: 10.1093/infdis/jiu340

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  6 in total

1.  Ultradeep pyrosequencing of NS3 to predict response to triple therapy with protease inhibitors in previously treated chronic hepatitis C patients.

Authors:  Sylvie Larrat; Om Kulkarni; Jean-Baptiste Claude; Réjane Beugnot; Michaël G B Blum; Katia Fusillier; Julien Lupo; Pauline Tremeaux; Agnès Plages; Alice Marlu; Hervé Duborjal; Anne Signori-Schmuck; Olivier Francois; Jean-Pierre Zarski; Patrice Morand; Vincent Leroy
Journal:  J Clin Microbiol       Date:  2014-11-19       Impact factor: 5.948

Review 2.  Predictive factors associated with hepatitis C antiviral therapy response.

Authors:  Lourianne Nascimento Cavalcante; André Castro Lyra
Journal:  World J Hepatol       Date:  2015-06-28

Review 3.  Direct-acting antiviral agents for hepatitis C: structural and mechanistic insights.

Authors:  Matthias Götte; Jordan J Feld
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2016-05-05       Impact factor: 46.802

4.  Pre-existence and Persistence of Resistant Minority Hepatitis C Virus Variants in Genotype 1-Infected Patients Treated With Simeprevir/Peginterferon/Ribavirin.

Authors:  Bart Fevery; Kim Thys; Veerle Van Eygen; Thierry Verbinnen; Elizabeth Van Rossem; Annemie Buelens; Jeroen Aerssens; James Witek; Gaston Picchio; Sandra De Meyer; Oliver Lenz
Journal:  Open Forum Infect Dis       Date:  2016-03-14       Impact factor: 3.835

5.  Investigation of NS3 Protease Resistance-Associated Variants and Phenotypes for the Prediction of Treatment Response to HCV Triple Therapy.

Authors:  Julia Dietz; Daniel Rupp; Simone Susser; Johannes Vermehren; Kai-Henrik Peiffer; Natalie Filmann; Dimitra Bon; Thomas Kuntzen; Stefan Mauss; Georgios Grammatikos; Dany Perner; Caterina Berkowski; Eva Herrmann; Stefan Zeuzem; Ralf Bartenschlager; Christoph Sarrazin
Journal:  PLoS One       Date:  2016-06-09       Impact factor: 3.240

6.  Virology analysis in HCV genotype 1-infected patients treated with the combination of simeprevir and TMC647055/ritonavir, with and without ribavirin, and JNJ-56914845.

Authors:  Leen Vijgen; Kim Thys; An Vandebosch; Pieter Van Remoortere; René Verloes; Sandra De Meyer
Journal:  Virol J       Date:  2017-05-31       Impact factor: 4.099

  6 in total

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