Literature DB >> 24940283

(E)-1,3-Dimethyl-2,6-di-phenyl-piperidin-4-one O-(phen-oxy-carbon-yl)oxime.

B Raghuvarman1, R Sivakumar2, K Gokula Krishnan2, V Thanikachalam2, S Aravindhan1.   

Abstract

The title piperidine derivative, C26H26N2O3, has an E conformation about the N=C bond. The piperidine ring has a chair conformation and its mean plane is almost perpendicular to the attached phenyl rings, making dihedral angles of 87.47 (9) and 87.34 (8)°. The planes of these two phenyl rings are inclined to one another by 60.38 (9)°. The plane of the terminal phenyl ring is tilted at an angle of 32.79 (9)° to the mean plane of the piperidine ring. The mol-ecular conformation is stabilized by two intra-molecular C-H⋯O contacts. There are no significant inter-molecular inter-actions in the crystal.

Entities:  

Year:  2014        PMID: 24940283      PMCID: PMC4051028          DOI: 10.1107/S1600536814010526

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of piperidine derivatives, see, for example: Moldt et al. (1997 ▶); Peters et al. (2009 ▶). For asymmetry parameters, see: Nardelli (1983 ▶).

Experimental

Crystal data

C26H26N2O3 M = 414.49 Monoclinic, a = 16.2004 (12) Å b = 11.9587 (10) Å c = 11.3601 (7) Å β = 102.547 (2)° V = 2148.3 (3) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker 2004 ▶) T min = 0.979, T max = 0.983 27566 measured reflections 6686 independent reflections 3950 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.180 S = 1.01 6686 reflections 282 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.35 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2/SAINT (Bruker, 2004 ▶); data reduction: SAINT/XPREP ; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814010526/su2678sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814010526/su2678Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814010526/su2678Isup3.cml CCDC reference: 1001814 Additional supporting information: crystallographic information; 3D view; checkCIF report
C26H26N2O3F(000) = 880
Mr = 414.49Dx = 1.282 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 8834 reflections
a = 16.2004 (12) Åθ = 2.1–31.2°
b = 11.9587 (10) ŵ = 0.08 mm1
c = 11.3601 (7) ÅT = 293 K
β = 102.547 (2)°Block, colourless
V = 2148.3 (3) Å30.25 × 0.20 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer6686 independent reflections
Radiation source: fine-focus sealed tube3950 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
ω and φ scanθmax = 30.8°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker 2004)h = −23→21
Tmin = 0.979, Tmax = 0.983k = −17→17
27566 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.180H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.093P)2 + 0.2301P] where P = (Fo2 + 2Fc2)/3
6686 reflections(Δ/σ)max < 0.001
282 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C20.16989 (9)0.35382 (12)0.83490 (12)0.0379 (3)
H20.13820.29970.87260.045*
C30.26100 (11)0.31168 (15)0.85152 (13)0.0467 (4)
H3A0.26080.23550.82200.056*
H3B0.29150.35790.80510.056*
C40.30428 (9)0.31542 (13)0.98144 (13)0.0393 (3)
C50.30006 (9)0.42707 (12)1.03942 (13)0.0389 (3)
H50.32530.48150.99330.047*
C60.20588 (9)0.45817 (12)1.02319 (12)0.0368 (3)
H60.17780.39951.06030.044*
C70.19662 (9)0.56761 (13)1.08548 (12)0.0382 (3)
C80.15971 (11)0.57068 (15)1.18468 (14)0.0505 (4)
H80.13850.50531.21120.061*
C90.15411 (12)0.67029 (18)1.24476 (15)0.0590 (5)
H90.12930.67111.31130.071*
C100.18471 (12)0.76735 (16)1.20726 (15)0.0565 (5)
H100.18060.83401.24770.068*
C110.22174 (12)0.76556 (15)1.10914 (16)0.0529 (4)
H110.24300.83121.08330.064*
C120.22743 (11)0.66632 (14)1.04893 (14)0.0455 (4)
H120.25250.66610.98260.055*
C130.12923 (10)0.35957 (13)0.70176 (12)0.0399 (3)
C140.16171 (12)0.42803 (15)0.62530 (14)0.0509 (4)
H140.21050.46920.65500.061*
C150.12225 (15)0.43587 (17)0.50478 (15)0.0654 (6)
H150.14450.48220.45370.078*
C160.05001 (15)0.37504 (19)0.46032 (16)0.0700 (6)
H160.02280.38170.37960.084*
C170.01834 (14)0.30530 (19)0.53423 (18)0.0689 (6)
H17−0.02980.26300.50380.083*
C180.05790 (12)0.29753 (16)0.65455 (16)0.0545 (4)
H180.03610.24960.70470.065*
C190.34923 (12)0.43356 (15)1.16909 (15)0.0546 (4)
H19A0.32140.38911.21930.082*
H19B0.35190.50991.19580.082*
H19C0.40550.40581.17430.082*
C200.37323 (10)0.05039 (13)1.04333 (14)0.0445 (4)
C210.41582 (10)−0.13514 (13)1.00076 (14)0.0446 (4)
C220.39797 (12)−0.21341 (15)0.91128 (15)0.0534 (4)
H220.3654−0.19510.83580.064*
C230.42925 (14)−0.32043 (16)0.93527 (19)0.0640 (5)
H230.4181−0.37460.87520.077*
C240.47672 (13)−0.34739 (16)1.04712 (19)0.0619 (5)
H240.4969−0.41991.06300.074*
C250.49410 (13)−0.26815 (16)1.13426 (18)0.0622 (5)
H250.5262−0.28661.21000.075*
C260.46459 (12)−0.16009 (15)1.11162 (16)0.0587 (5)
H260.4777−0.10531.17080.070*
C270.07667 (10)0.49575 (17)0.87840 (15)0.0533 (4)
H27A0.05050.49810.79410.080*
H27B0.07320.56820.91340.080*
H27C0.04800.44200.91800.080*
N10.16563 (7)0.46358 (10)0.89327 (10)0.0357 (3)
N20.34143 (8)0.23699 (11)1.04748 (11)0.0438 (3)
O10.34161 (8)0.13746 (10)0.97534 (9)0.0528 (3)
O20.38576 (11)0.04349 (12)1.14880 (12)0.0795 (5)
O30.38400 (9)−0.02830 (10)0.96515 (10)0.0643 (4)
U11U22U33U12U13U23
C20.0455 (8)0.0346 (7)0.0319 (6)0.0009 (6)0.0048 (6)0.0017 (5)
C30.0558 (10)0.0460 (9)0.0356 (7)0.0169 (7)0.0042 (6)0.0000 (6)
C40.0394 (7)0.0390 (8)0.0379 (7)0.0063 (6)0.0054 (6)0.0017 (6)
C50.0430 (8)0.0345 (7)0.0369 (7)0.0018 (6)0.0035 (6)0.0030 (6)
C60.0432 (8)0.0374 (8)0.0297 (6)0.0003 (6)0.0077 (5)0.0022 (5)
C70.0403 (8)0.0421 (8)0.0315 (6)0.0047 (6)0.0061 (5)−0.0001 (6)
C80.0569 (10)0.0568 (11)0.0406 (8)−0.0011 (8)0.0171 (7)−0.0023 (7)
C90.0672 (12)0.0733 (13)0.0403 (8)0.0103 (10)0.0200 (8)−0.0092 (8)
C100.0633 (11)0.0537 (11)0.0486 (9)0.0150 (9)0.0039 (8)−0.0141 (8)
C110.0594 (10)0.0407 (9)0.0575 (10)0.0038 (8)0.0101 (8)−0.0021 (7)
C120.0530 (9)0.0439 (9)0.0417 (8)0.0065 (7)0.0147 (7)0.0011 (7)
C130.0472 (8)0.0369 (8)0.0330 (6)0.0077 (6)0.0033 (6)−0.0026 (6)
C140.0631 (11)0.0490 (10)0.0403 (8)0.0061 (8)0.0106 (7)0.0045 (7)
C150.0961 (16)0.0622 (12)0.0386 (8)0.0197 (11)0.0164 (9)0.0081 (8)
C160.0919 (15)0.0724 (14)0.0355 (8)0.0366 (12)−0.0086 (9)−0.0114 (9)
C170.0645 (12)0.0750 (14)0.0556 (11)0.0092 (10)−0.0126 (9)−0.0179 (10)
C180.0552 (10)0.0560 (11)0.0483 (9)−0.0004 (8)0.0024 (7)−0.0042 (8)
C190.0599 (10)0.0488 (10)0.0455 (8)0.0038 (8)−0.0094 (7)−0.0011 (7)
C200.0463 (9)0.0403 (8)0.0439 (8)0.0077 (7)0.0033 (6)0.0008 (6)
C210.0487 (9)0.0367 (8)0.0461 (8)0.0044 (7)0.0051 (7)0.0002 (7)
C220.0631 (11)0.0483 (10)0.0477 (9)0.0000 (8)0.0097 (8)−0.0060 (8)
C230.0785 (13)0.0450 (10)0.0721 (12)−0.0025 (9)0.0240 (10)−0.0132 (9)
C240.0689 (12)0.0390 (9)0.0833 (14)0.0092 (9)0.0283 (10)0.0044 (9)
C250.0678 (12)0.0529 (11)0.0615 (11)0.0182 (9)0.0044 (9)0.0091 (9)
C260.0675 (11)0.0477 (10)0.0521 (9)0.0146 (8)−0.0066 (8)−0.0046 (8)
C270.0437 (9)0.0664 (12)0.0465 (9)0.0141 (8)0.0029 (7)−0.0087 (8)
N10.0373 (6)0.0380 (6)0.0306 (5)0.0054 (5)0.0046 (4)−0.0008 (5)
N20.0496 (7)0.0368 (7)0.0420 (7)0.0081 (6)0.0037 (5)−0.0018 (5)
O10.0691 (8)0.0402 (6)0.0433 (6)0.0174 (6)−0.0004 (5)0.0004 (5)
O20.1305 (14)0.0596 (9)0.0476 (7)0.0390 (9)0.0178 (8)0.0083 (6)
O30.0964 (10)0.0428 (7)0.0440 (6)0.0213 (7)−0.0060 (6)−0.0031 (5)
C2—N11.4790 (18)C15—C161.377 (3)
C2—C131.5144 (18)C15—H150.9300
C2—C31.532 (2)C16—C171.360 (3)
C2—H20.9800C16—H160.9300
C3—C41.491 (2)C17—C181.381 (2)
C3—H3A0.9700C17—H170.9300
C3—H3B0.9700C18—H180.9300
C4—N21.2683 (19)C19—H19A0.9600
C4—C51.497 (2)C19—H19B0.9600
C5—C191.517 (2)C19—H19C0.9600
C5—C61.542 (2)C20—O21.1738 (19)
C5—H50.9800C20—O11.3310 (18)
C6—N11.4797 (17)C20—O31.3312 (19)
C6—C71.511 (2)C21—C221.366 (2)
C6—H60.9800C21—C261.366 (2)
C7—C121.380 (2)C21—O31.4040 (19)
C7—C81.386 (2)C22—C231.382 (3)
C8—C91.386 (3)C22—H220.9300
C8—H80.9300C23—C241.373 (3)
C9—C101.366 (3)C23—H230.9300
C9—H90.9300C24—C251.355 (3)
C10—C111.376 (3)C24—H240.9300
C10—H100.9300C25—C261.382 (2)
C11—C121.383 (2)C25—H250.9300
C11—H110.9300C26—H260.9300
C12—H120.9300C27—N11.4655 (19)
C13—C141.378 (2)C27—H27A0.9600
C13—C181.380 (2)C27—H27B0.9600
C14—C151.383 (2)C27—H27C0.9600
C14—H140.9300N2—O11.4454 (16)
N1—C2—C13110.79 (11)C16—C15—C14120.03 (19)
N1—C2—C3111.98 (12)C16—C15—H15120.0
C13—C2—C3109.65 (12)C14—C15—H15120.0
N1—C2—H2108.1C17—C16—C15120.12 (16)
C13—C2—H2108.1C17—C16—H16119.9
C3—C2—H2108.1C15—C16—H16119.9
C4—C3—C2110.21 (12)C16—C17—C18119.7 (2)
C4—C3—H3A109.6C16—C17—H17120.1
C2—C3—H3A109.6C18—C17—H17120.1
C4—C3—H3B109.6C13—C18—C17121.20 (19)
C2—C3—H3B109.6C13—C18—H18119.4
H3A—C3—H3B108.1C17—C18—H18119.4
N2—C4—C3128.62 (14)C5—C19—H19A109.5
N2—C4—C5117.42 (13)C5—C19—H19B109.5
C3—C4—C5113.94 (12)H19A—C19—H19B109.5
C4—C5—C19114.10 (12)C5—C19—H19C109.5
C4—C5—C6107.53 (12)H19A—C19—H19C109.5
C19—C5—C6113.64 (13)H19B—C19—H19C109.5
C4—C5—H5107.1O2—C20—O1127.35 (15)
C19—C5—H5107.1O2—C20—O3127.78 (15)
C6—C5—H5107.1O1—C20—O3104.81 (13)
N1—C6—C7111.23 (11)C22—C21—C26121.53 (16)
N1—C6—C5109.87 (11)C22—C21—O3113.84 (14)
C7—C6—C5110.45 (12)C26—C21—O3124.53 (15)
N1—C6—H6108.4C21—C22—C23118.60 (17)
C7—C6—H6108.4C21—C22—H22120.7
C5—C6—H6108.4C23—C22—H22120.7
C12—C7—C8118.03 (14)C24—C23—C22120.51 (18)
C12—C7—C6121.39 (13)C24—C23—H23119.7
C8—C7—C6120.53 (14)C22—C23—H23119.7
C9—C8—C7120.60 (17)C25—C24—C23119.84 (18)
C9—C8—H8119.7C25—C24—H24120.1
C7—C8—H8119.7C23—C24—H24120.1
C10—C9—C8120.66 (16)C24—C25—C26120.61 (18)
C10—C9—H9119.7C24—C25—H25119.7
C8—C9—H9119.7C26—C25—H25119.7
C9—C10—C11119.40 (16)C21—C26—C25118.88 (17)
C9—C10—H10120.3C21—C26—H26120.6
C11—C10—H10120.3C25—C26—H26120.6
C10—C11—C12120.11 (17)N1—C27—H27A109.5
C10—C11—H11119.9N1—C27—H27B109.5
C12—C11—H11119.9H27A—C27—H27B109.5
C7—C12—C11121.19 (15)N1—C27—H27C109.5
C7—C12—H12119.4H27A—C27—H27C109.5
C11—C12—H12119.4H27B—C27—H27C109.5
C14—C13—C18118.45 (14)C27—N1—C2108.77 (12)
C14—C13—C2120.91 (14)C27—N1—C6109.62 (11)
C18—C13—C2120.63 (14)C2—N1—C6110.79 (11)
C13—C14—C15120.44 (18)C4—N2—O1109.43 (11)
C13—C14—H14119.8C20—O1—N2111.29 (11)
C15—C14—H14119.8C20—O3—C21122.97 (13)
N1—C2—C3—C451.47 (17)C14—C15—C16—C17−1.4 (3)
C13—C2—C3—C4174.87 (13)C15—C16—C17—C181.4 (3)
C2—C3—C4—N2125.06 (18)C14—C13—C18—C17−1.5 (3)
C2—C3—C4—C5−53.16 (18)C2—C13—C18—C17177.48 (16)
N2—C4—C5—C195.7 (2)C16—C17—C18—C130.1 (3)
C3—C4—C5—C19−175.91 (14)C26—C21—C22—C231.0 (3)
N2—C4—C5—C6−121.35 (15)O3—C21—C22—C23177.45 (17)
C3—C4—C5—C657.08 (16)C21—C22—C23—C240.5 (3)
C4—C5—C6—N1−59.89 (15)C22—C23—C24—C25−0.9 (3)
C19—C5—C6—N1172.82 (12)C23—C24—C25—C26−0.1 (3)
C4—C5—C6—C7177.03 (11)C22—C21—C26—C25−2.1 (3)
C19—C5—C6—C749.75 (17)O3—C21—C26—C25−178.08 (19)
N1—C6—C7—C12−58.45 (18)C24—C25—C26—C211.6 (3)
C5—C6—C7—C1263.83 (17)C13—C2—N1—C2759.84 (15)
N1—C6—C7—C8124.20 (15)C3—C2—N1—C27−177.40 (12)
C5—C6—C7—C8−113.52 (15)C13—C2—N1—C6−179.61 (12)
C12—C7—C8—C90.1 (2)C3—C2—N1—C6−56.85 (15)
C6—C7—C8—C9177.50 (15)C7—C6—N1—C27−56.06 (16)
C7—C8—C9—C100.1 (3)C5—C6—N1—C27−178.67 (13)
C8—C9—C10—C11−0.3 (3)C7—C6—N1—C2−176.10 (12)
C9—C10—C11—C120.3 (3)C5—C6—N1—C261.28 (15)
C8—C7—C12—C110.0 (2)C3—C4—N2—O13.7 (2)
C6—C7—C12—C11−177.46 (14)C5—C4—N2—O1−178.11 (12)
C10—C11—C12—C7−0.1 (3)O2—C20—O1—N213.6 (3)
N1—C2—C13—C1462.89 (18)O3—C20—O1—N2−169.00 (13)
C3—C2—C13—C14−61.21 (19)C4—N2—O1—C20−174.36 (14)
N1—C2—C13—C18−116.10 (16)O2—C20—O3—C21−1.9 (3)
C3—C2—C13—C18119.80 (17)O1—C20—O3—C21−179.34 (15)
C18—C13—C14—C151.5 (3)C22—C21—O3—C20160.61 (16)
C2—C13—C14—C15−177.54 (15)C26—C21—O3—C20−23.1 (3)
C13—C14—C15—C160.0 (3)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O10.972.272.6881 (18)105
C26—H26···O20.932.302.823 (2)115
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3A⋯O10.972.272.6881 (18)105
C26—H26⋯O20.932.302.823 (2)115
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  1 in total

1.  Crystal structures of (E)-(3-ethyl-1-methyl-2,6-di-phenyl-piperidin-4-yl-idene)amino phenyl carbonate and (E)-(3-isopropyl-1-methyl-2,6-di-phenyl-piperidin-4-yl-idene)amino phenyl carbonate.

Authors:  B Raghuvarman; R Sivakumar; V Thanikachalam; S Aravindhan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-09-13
  1 in total

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