Literature DB >> 24940266

2,4,6-Tri-nitro-phenyl 3-bromo-benzoate.

Rodolfo Moreno-Fuquen1, Fabricio Mosquera1, Javier Ellena2, Juan C Tenorio2.   

Abstract

In the title picryl-substituted ester, C13H6BrN3O8, the mean plane of the central ester C-O-C(=O)-C fragment (r.m.s. deviation= 0.0186 Å) is rotated by 84.73 (7)° and 19.92 (12)° to the picryl and phenyl rings, respectively. In the crystal, the mol-ecules are linked by C-H⋯O inter-actions, forming centrosymmetric dimers enclosing R (2) 2(10) and R (2) 2(22) ring motifs along [001] and further helical chains of dimers enclosing R (2) 2(10) ring motifs along [010].

Entities:  

Year:  2014        PMID: 24940266      PMCID: PMC4051004          DOI: 10.1107/S1600536814010952

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, including isostructural 2,4,6-tri­nitro­phenyl 3-chloro­benzoate, see: Moreno-Fuquen et al. (2013a ▶,b ▶,c ▶). For a detailed study of the central ester moiety, see: Moreno-Fuquen et al. (2012 ▶). For hydrogen bonding, see: Nardelli (1995 ▶) and for hydrogen-bond graph-set motifs, see: Etter (1990 ▶).

Experimental

Crystal data

C13H6BrN3O8 M = 412.12 Monoclinic, a = 11.2925 (4) Å b = 9.5672 (3) Å c = 14.0560 (6) Å β = 94.625 (2)° V = 1513.63 (10) Å3 Z = 4 Mo Kα radiation μ = 2.77 mm−1 T = 295 K 0.27 × 0.24 × 0.13 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.486, T max = 0.601 5971 measured reflections 3082 independent reflections 2572 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.081 S = 1.03 3082 reflections 227 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.50 e Å−3 Data collection: COLLECT (Nonius, 2000 ▶); cell refinement: HKL SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: HKL DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814010952/fk2082sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814010952/fk2082Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814010952/fk2082Isup3.cml CCDC reference: 1002544 Additional supporting information: crystallographic information; 3D view; checkCIF report
C13H6BrN3O8F(000) = 816
Mr = 412.12Dx = 1.808 Mg m3
Monoclinic, P21/cMelting point: 396(1) K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.2925 (4) ÅCell parameters from 5804 reflections
b = 9.5672 (3) Åθ = 3.1–26.4°
c = 14.0560 (6) ŵ = 2.77 mm1
β = 94.625 (2)°T = 295 K
V = 1513.63 (10) Å3Block, pale-yellow
Z = 40.27 × 0.24 × 0.13 mm
Nonius KappaCCD diffractometer3082 independent reflections
Radiation source: fine-focus sealed tube2572 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.021
CCD rotation images, thick slices scansθmax = 26.4°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −14→14
Tmin = 0.486, Tmax = 0.601k = −11→11
5971 measured reflectionsl = −17→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H-atom parameters constrained
wR(F2) = 0.081w = 1/[σ2(Fo2) + (0.0403P)2 + 0.7085P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3082 reflectionsΔρmax = 0.42 e Å3
227 parametersΔρmin = −0.50 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0122 (8)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.42777 (2)−0.02749 (3)0.715747 (17)0.05304 (13)
O10.1739 (2)0.4619 (2)0.36624 (13)0.0651 (5)
O20.0830 (2)0.5890 (2)0.25761 (16)0.0814 (7)
O3−0.1211 (2)0.3737 (3)−0.01520 (17)0.0930 (9)
O4−0.06765 (18)0.1728 (2)−0.06105 (14)0.0635 (5)
O50.3193 (2)−0.0080 (2)0.10541 (17)0.0731 (6)
O60.2583 (2)−0.0484 (2)0.24323 (15)0.0713 (6)
O70.28431 (12)0.23650 (17)0.30276 (10)0.0385 (4)
O80.15437 (13)0.14296 (19)0.39805 (11)0.0453 (4)
N10.12577 (19)0.4786 (2)0.28662 (15)0.0457 (5)
N2−0.06070 (18)0.2704 (2)−0.00614 (15)0.0489 (5)
N30.26169 (17)0.0199 (2)0.17035 (15)0.0445 (5)
C10.19417 (17)0.2459 (2)0.23105 (14)0.0335 (5)
C20.11868 (19)0.3606 (2)0.21900 (15)0.0360 (5)
C30.03478 (19)0.3701 (2)0.14191 (15)0.0385 (5)
H3−0.01670.44600.13510.046*
C40.02977 (18)0.2642 (2)0.07569 (14)0.0356 (5)
C50.10472 (18)0.1513 (2)0.08195 (15)0.0364 (5)
H50.10180.08290.03480.044*
C60.18467 (18)0.1439 (2)0.16128 (14)0.0342 (5)
C70.25235 (18)0.1838 (2)0.38886 (14)0.0355 (5)
C80.35354 (18)0.1859 (2)0.46246 (14)0.0350 (5)
C90.4515 (2)0.2719 (3)0.45653 (16)0.0435 (5)
H90.45740.32960.40390.052*
C100.5406 (2)0.2703 (3)0.53043 (18)0.0531 (6)
H100.60600.32880.52760.064*
C110.5337 (2)0.1834 (3)0.60789 (17)0.0482 (6)
H110.59390.18290.65710.058*
C120.43635 (19)0.0970 (2)0.61152 (15)0.0383 (5)
C130.34547 (18)0.0974 (2)0.54011 (15)0.0368 (5)
H130.27990.03940.54370.044*
U11U22U33U12U13U23
Br10.06119 (19)0.0611 (2)0.03652 (16)0.01162 (12)0.00239 (11)0.01329 (11)
O10.0973 (15)0.0632 (13)0.0334 (10)−0.0016 (11)−0.0035 (9)−0.0101 (9)
O20.1105 (18)0.0569 (14)0.0728 (14)0.0343 (13)−0.0170 (12)−0.0218 (11)
O30.1003 (16)0.0825 (16)0.0870 (16)0.0552 (14)−0.0486 (13)−0.0217 (13)
O40.0767 (12)0.0491 (11)0.0588 (12)−0.0011 (10)−0.0308 (10)−0.0065 (9)
O50.0713 (13)0.0773 (15)0.0722 (15)0.0310 (11)0.0148 (11)−0.0117 (11)
O60.0920 (15)0.0594 (13)0.0594 (13)0.0284 (11)−0.0131 (11)0.0154 (10)
O70.0352 (7)0.0526 (10)0.0269 (7)−0.0028 (7)−0.0020 (6)0.0040 (7)
O80.0388 (8)0.0594 (11)0.0369 (8)−0.0083 (8)−0.0021 (6)0.0078 (8)
N10.0504 (11)0.0471 (13)0.0404 (11)0.0032 (10)0.0086 (9)−0.0076 (9)
N20.0510 (12)0.0476 (13)0.0453 (11)0.0063 (10)−0.0137 (9)0.0030 (10)
N30.0431 (11)0.0434 (12)0.0447 (12)0.0097 (9)−0.0103 (9)−0.0057 (10)
C10.0333 (10)0.0419 (12)0.0249 (9)−0.0002 (9)0.0009 (8)0.0042 (9)
C20.0408 (11)0.0375 (12)0.0302 (10)0.0016 (10)0.0052 (9)−0.0017 (9)
C30.0404 (11)0.0371 (12)0.0379 (12)0.0052 (10)0.0034 (9)0.0038 (10)
C40.0385 (11)0.0381 (12)0.0289 (10)0.0024 (10)−0.0044 (8)0.0055 (9)
C50.0430 (11)0.0369 (12)0.0286 (10)0.0014 (10)−0.0009 (9)0.0004 (9)
C60.0354 (10)0.0360 (12)0.0309 (10)0.0057 (9)0.0004 (8)0.0040 (9)
C70.0394 (11)0.0384 (12)0.0283 (10)0.0006 (10)0.0000 (8)0.0011 (9)
C80.0365 (10)0.0388 (12)0.0289 (10)0.0022 (10)−0.0013 (8)−0.0013 (9)
C90.0451 (12)0.0461 (14)0.0382 (12)−0.0038 (11)−0.0030 (10)0.0090 (10)
C100.0452 (13)0.0570 (16)0.0545 (15)−0.0135 (12)−0.0116 (11)0.0084 (13)
C110.0445 (12)0.0549 (15)0.0423 (13)0.0012 (12)−0.0136 (10)0.0027 (12)
C120.0445 (12)0.0401 (13)0.0300 (10)0.0103 (10)0.0008 (9)0.0011 (9)
C130.0378 (11)0.0392 (13)0.0332 (11)−0.0003 (10)0.0016 (9)−0.0002 (9)
Br1—C121.897 (2)C3—C41.374 (3)
O1—N11.215 (3)C3—H30.9300
O2—N11.218 (3)C4—C51.370 (3)
O3—N21.201 (3)C5—C61.379 (3)
O4—N21.210 (3)C5—H50.9300
O5—N31.193 (3)C7—C81.478 (3)
O6—N31.218 (3)C8—C91.387 (3)
O7—C11.376 (2)C8—C131.391 (3)
O7—C71.386 (2)C9—C101.387 (3)
O8—C71.190 (2)C9—H90.9300
N1—C21.474 (3)C10—C111.377 (3)
N2—C41.477 (3)C10—H100.9300
N3—C61.470 (3)C11—C121.379 (3)
C1—C61.382 (3)C11—H110.9300
C1—C21.392 (3)C12—C131.376 (3)
C2—C31.384 (3)C13—H130.9300
C1—O7—C7115.73 (16)C5—C6—C1123.1 (2)
O1—N1—O2123.9 (2)C5—C6—N3117.15 (19)
O1—N1—C2119.4 (2)C1—C6—N3119.79 (18)
O2—N1—C2116.7 (2)O8—C7—O7121.61 (18)
O3—N2—O4124.0 (2)O8—C7—C8126.98 (19)
O3—N2—C4117.8 (2)O7—C7—C8111.41 (17)
O4—N2—C4118.1 (2)C9—C8—C13120.8 (2)
O5—N3—O6125.4 (2)C9—C8—C7122.8 (2)
O5—N3—C6118.0 (2)C13—C8—C7116.42 (19)
O6—N3—C6116.5 (2)C8—C9—C10118.9 (2)
O7—C1—C6118.96 (19)C8—C9—H9120.6
O7—C1—C2123.38 (19)C10—C9—H9120.6
C6—C1—C2117.32 (18)C11—C10—C9121.0 (2)
C3—C2—C1121.4 (2)C11—C10—H10119.5
C3—C2—N1116.9 (2)C9—C10—H10119.5
C1—C2—N1121.65 (19)C10—C11—C12119.1 (2)
C4—C3—C2118.0 (2)C10—C11—H11120.4
C4—C3—H3121.0C12—C11—H11120.4
C2—C3—H3121.0C13—C12—C11121.4 (2)
C5—C4—C3123.1 (2)C13—C12—Br1118.90 (17)
C5—C4—N2117.8 (2)C11—C12—Br1119.68 (16)
C3—C4—N2119.1 (2)C12—C13—C8118.8 (2)
C4—C5—C6117.0 (2)C12—C13—H13120.6
C4—C5—H5121.5C8—C13—H13120.6
C6—C5—H5121.5
C7—O7—C1—C6−100.4 (2)C2—C1—C6—C5−0.1 (3)
C7—O7—C1—C286.5 (3)O7—C1—C6—N36.8 (3)
O7—C1—C2—C3175.27 (19)C2—C1—C6—N3−179.71 (19)
C6—C1—C2—C32.0 (3)O5—N3—C6—C554.2 (3)
O7—C1—C2—N1−3.6 (3)O6—N3—C6—C5−123.6 (2)
C6—C1—C2—N1−176.81 (19)O5—N3—C6—C1−126.1 (2)
O1—N1—C2—C3161.2 (2)O6—N3—C6—C156.0 (3)
O2—N1—C2—C3−19.6 (3)C1—O7—C7—O83.6 (3)
O1—N1—C2—C1−19.9 (3)C1—O7—C7—C8−176.60 (18)
O2—N1—C2—C1159.3 (2)O8—C7—C8—C9−159.4 (2)
C1—C2—C3—C4−1.6 (3)O7—C7—C8—C920.8 (3)
N1—C2—C3—C4177.32 (19)O8—C7—C8—C1319.8 (3)
C2—C3—C4—C5−0.9 (3)O7—C7—C8—C13−159.95 (19)
C2—C3—C4—N2178.70 (19)C13—C8—C9—C10−1.3 (4)
O3—N2—C4—C5−175.1 (3)C7—C8—C9—C10177.9 (2)
O4—N2—C4—C53.3 (3)C8—C9—C10—C111.1 (4)
O3—N2—C4—C35.3 (4)C9—C10—C11—C12−0.1 (4)
O4—N2—C4—C3−176.3 (2)C10—C11—C12—C13−0.9 (4)
C3—C4—C5—C62.7 (3)C10—C11—C12—Br1178.1 (2)
N2—C4—C5—C6−176.87 (19)C11—C12—C13—C80.7 (3)
C4—C5—C6—C1−2.2 (3)Br1—C12—C13—C8−178.21 (16)
C4—C5—C6—N3177.4 (2)C9—C8—C13—C120.4 (3)
O7—C1—C6—C5−173.62 (19)C7—C8—C13—C12−178.9 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5···O4i0.932.513.140 (3)125
C11—H11···O6ii0.932.463.282 (3)148
C13—H13···O3iii0.932.403.314 (3)166
C3—H3···O8iv0.932.463.391 (3)175
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯O4i 0.932.513.140 (3)125
C11—H11⋯O6ii 0.932.463.282 (3)148
C13—H13⋯O3iii 0.932.403.314 (3)166
C3—H3⋯O8iv 0.932.463.391 (3)175

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,4,6-Tri-nitro-phenyl 3-chloro-benzoate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Javier Ellena; C A De Simone; Juan C Tenorio
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-25

3.  2,4,6-Tri-nitro-phenyl furan-2-carboxyl-ate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Alan R Kennedy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-23

4.  2,4,6-Tri-nitro-phenyl 4-bromo-benzoate.

Authors:  Rodolfo Moreno-Fuquen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-20

5.  2,4,6-Trinitro-phenyl 3-methyl-benzoate.

Authors:  Rodolfo Moreno-Fuquen; Fabricio Mosquera; Javier Ellena; Juan C Tenorio
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23
  5 in total

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