| Literature DB >> 24940266 |
Rodolfo Moreno-Fuquen1, Fabricio Mosquera1, Javier Ellena2, Juan C Tenorio2.
Abstract
In the title picryl-substituted ester, C13H6BrN3O8, the mean plane of the central ester C-O-C(=O)-C fragment (r.m.s. deviation= 0.0186 Å) is rotated by 84.73 (7)° and 19.92 (12)° to the picryl and phenyl rings, respectively. In the crystal, the mol-ecules are linked by C-H⋯O inter-actions, forming centrosymmetric dimers enclosing R (2) 2(10) and R (2) 2(22) ring motifs along [001] and further helical chains of dimers enclosing R (2) 2(10) ring motifs along [010].Entities:
Year: 2014 PMID: 24940266 PMCID: PMC4051004 DOI: 10.1107/S1600536814010952
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H6BrN3O8 | |
| Monoclinic, | Melting point: 396(1) K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 5804 reflections | |
| θ = 3.1–26.4° | |
| µ = 2.77 mm−1 | |
| β = 94.625 (2)° | |
| Block, pale-yellow | |
| 0.27 × 0.24 × 0.13 mm |
| Nonius KappaCCD diffractometer | 3082 independent reflections |
| Radiation source: fine-focus sealed tube | 2572 reflections with |
| Graphite monochromator | |
| CCD rotation images, thick slices scans | θmax = 26.4°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 5971 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3082 reflections | Δρmax = 0.42 e Å−3 |
| 227 parameters | Δρmin = −0.50 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0122 (8) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.42777 (2) | −0.02749 (3) | 0.715747 (17) | 0.05304 (13) | |
| O1 | 0.1739 (2) | 0.4619 (2) | 0.36624 (13) | 0.0651 (5) | |
| O2 | 0.0830 (2) | 0.5890 (2) | 0.25761 (16) | 0.0814 (7) | |
| O3 | −0.1211 (2) | 0.3737 (3) | −0.01520 (17) | 0.0930 (9) | |
| O4 | −0.06765 (18) | 0.1728 (2) | −0.06105 (14) | 0.0635 (5) | |
| O5 | 0.3193 (2) | −0.0080 (2) | 0.10541 (17) | 0.0731 (6) | |
| O6 | 0.2583 (2) | −0.0484 (2) | 0.24323 (15) | 0.0713 (6) | |
| O7 | 0.28431 (12) | 0.23650 (17) | 0.30276 (10) | 0.0385 (4) | |
| O8 | 0.15437 (13) | 0.14296 (19) | 0.39805 (11) | 0.0453 (4) | |
| N1 | 0.12577 (19) | 0.4786 (2) | 0.28662 (15) | 0.0457 (5) | |
| N2 | −0.06070 (18) | 0.2704 (2) | −0.00614 (15) | 0.0489 (5) | |
| N3 | 0.26169 (17) | 0.0199 (2) | 0.17035 (15) | 0.0445 (5) | |
| C1 | 0.19417 (17) | 0.2459 (2) | 0.23105 (14) | 0.0335 (5) | |
| C2 | 0.11868 (19) | 0.3606 (2) | 0.21900 (15) | 0.0360 (5) | |
| C3 | 0.03478 (19) | 0.3701 (2) | 0.14191 (15) | 0.0385 (5) | |
| H3 | −0.0167 | 0.4460 | 0.1351 | 0.046* | |
| C4 | 0.02977 (18) | 0.2642 (2) | 0.07569 (14) | 0.0356 (5) | |
| C5 | 0.10472 (18) | 0.1513 (2) | 0.08195 (15) | 0.0364 (5) | |
| H5 | 0.1018 | 0.0829 | 0.0348 | 0.044* | |
| C6 | 0.18467 (18) | 0.1439 (2) | 0.16128 (14) | 0.0342 (5) | |
| C7 | 0.25235 (18) | 0.1838 (2) | 0.38886 (14) | 0.0355 (5) | |
| C8 | 0.35354 (18) | 0.1859 (2) | 0.46246 (14) | 0.0350 (5) | |
| C9 | 0.4515 (2) | 0.2719 (3) | 0.45653 (16) | 0.0435 (5) | |
| H9 | 0.4574 | 0.3296 | 0.4039 | 0.052* | |
| C10 | 0.5406 (2) | 0.2703 (3) | 0.53043 (18) | 0.0531 (6) | |
| H10 | 0.6060 | 0.3288 | 0.5276 | 0.064* | |
| C11 | 0.5337 (2) | 0.1834 (3) | 0.60789 (17) | 0.0482 (6) | |
| H11 | 0.5939 | 0.1829 | 0.6571 | 0.058* | |
| C12 | 0.43635 (19) | 0.0970 (2) | 0.61152 (15) | 0.0383 (5) | |
| C13 | 0.34547 (18) | 0.0974 (2) | 0.54011 (15) | 0.0368 (5) | |
| H13 | 0.2799 | 0.0394 | 0.5437 | 0.044* |
| Br1 | 0.06119 (19) | 0.0611 (2) | 0.03652 (16) | 0.01162 (12) | 0.00239 (11) | 0.01329 (11) |
| O1 | 0.0973 (15) | 0.0632 (13) | 0.0334 (10) | −0.0016 (11) | −0.0035 (9) | −0.0101 (9) |
| O2 | 0.1105 (18) | 0.0569 (14) | 0.0728 (14) | 0.0343 (13) | −0.0170 (12) | −0.0218 (11) |
| O3 | 0.1003 (16) | 0.0825 (16) | 0.0870 (16) | 0.0552 (14) | −0.0486 (13) | −0.0217 (13) |
| O4 | 0.0767 (12) | 0.0491 (11) | 0.0588 (12) | −0.0011 (10) | −0.0308 (10) | −0.0065 (9) |
| O5 | 0.0713 (13) | 0.0773 (15) | 0.0722 (15) | 0.0310 (11) | 0.0148 (11) | −0.0117 (11) |
| O6 | 0.0920 (15) | 0.0594 (13) | 0.0594 (13) | 0.0284 (11) | −0.0131 (11) | 0.0154 (10) |
| O7 | 0.0352 (7) | 0.0526 (10) | 0.0269 (7) | −0.0028 (7) | −0.0020 (6) | 0.0040 (7) |
| O8 | 0.0388 (8) | 0.0594 (11) | 0.0369 (8) | −0.0083 (8) | −0.0021 (6) | 0.0078 (8) |
| N1 | 0.0504 (11) | 0.0471 (13) | 0.0404 (11) | 0.0032 (10) | 0.0086 (9) | −0.0076 (9) |
| N2 | 0.0510 (12) | 0.0476 (13) | 0.0453 (11) | 0.0063 (10) | −0.0137 (9) | 0.0030 (10) |
| N3 | 0.0431 (11) | 0.0434 (12) | 0.0447 (12) | 0.0097 (9) | −0.0103 (9) | −0.0057 (10) |
| C1 | 0.0333 (10) | 0.0419 (12) | 0.0249 (9) | −0.0002 (9) | 0.0009 (8) | 0.0042 (9) |
| C2 | 0.0408 (11) | 0.0375 (12) | 0.0302 (10) | 0.0016 (10) | 0.0052 (9) | −0.0017 (9) |
| C3 | 0.0404 (11) | 0.0371 (12) | 0.0379 (12) | 0.0052 (10) | 0.0034 (9) | 0.0038 (10) |
| C4 | 0.0385 (11) | 0.0381 (12) | 0.0289 (10) | 0.0024 (10) | −0.0044 (8) | 0.0055 (9) |
| C5 | 0.0430 (11) | 0.0369 (12) | 0.0286 (10) | 0.0014 (10) | −0.0009 (9) | 0.0004 (9) |
| C6 | 0.0354 (10) | 0.0360 (12) | 0.0309 (10) | 0.0057 (9) | 0.0004 (8) | 0.0040 (9) |
| C7 | 0.0394 (11) | 0.0384 (12) | 0.0283 (10) | 0.0006 (10) | 0.0000 (8) | 0.0011 (9) |
| C8 | 0.0365 (10) | 0.0388 (12) | 0.0289 (10) | 0.0022 (10) | −0.0013 (8) | −0.0013 (9) |
| C9 | 0.0451 (12) | 0.0461 (14) | 0.0382 (12) | −0.0038 (11) | −0.0030 (10) | 0.0090 (10) |
| C10 | 0.0452 (13) | 0.0570 (16) | 0.0545 (15) | −0.0135 (12) | −0.0116 (11) | 0.0084 (13) |
| C11 | 0.0445 (12) | 0.0549 (15) | 0.0423 (13) | 0.0012 (12) | −0.0136 (10) | 0.0027 (12) |
| C12 | 0.0445 (12) | 0.0401 (13) | 0.0300 (10) | 0.0103 (10) | 0.0008 (9) | 0.0011 (9) |
| C13 | 0.0378 (11) | 0.0392 (13) | 0.0332 (11) | −0.0003 (10) | 0.0016 (9) | −0.0002 (9) |
| Br1—C12 | 1.897 (2) | C3—C4 | 1.374 (3) |
| O1—N1 | 1.215 (3) | C3—H3 | 0.9300 |
| O2—N1 | 1.218 (3) | C4—C5 | 1.370 (3) |
| O3—N2 | 1.201 (3) | C5—C6 | 1.379 (3) |
| O4—N2 | 1.210 (3) | C5—H5 | 0.9300 |
| O5—N3 | 1.193 (3) | C7—C8 | 1.478 (3) |
| O6—N3 | 1.218 (3) | C8—C9 | 1.387 (3) |
| O7—C1 | 1.376 (2) | C8—C13 | 1.391 (3) |
| O7—C7 | 1.386 (2) | C9—C10 | 1.387 (3) |
| O8—C7 | 1.190 (2) | C9—H9 | 0.9300 |
| N1—C2 | 1.474 (3) | C10—C11 | 1.377 (3) |
| N2—C4 | 1.477 (3) | C10—H10 | 0.9300 |
| N3—C6 | 1.470 (3) | C11—C12 | 1.379 (3) |
| C1—C6 | 1.382 (3) | C11—H11 | 0.9300 |
| C1—C2 | 1.392 (3) | C12—C13 | 1.376 (3) |
| C2—C3 | 1.384 (3) | C13—H13 | 0.9300 |
| C1—O7—C7 | 115.73 (16) | C5—C6—C1 | 123.1 (2) |
| O1—N1—O2 | 123.9 (2) | C5—C6—N3 | 117.15 (19) |
| O1—N1—C2 | 119.4 (2) | C1—C6—N3 | 119.79 (18) |
| O2—N1—C2 | 116.7 (2) | O8—C7—O7 | 121.61 (18) |
| O3—N2—O4 | 124.0 (2) | O8—C7—C8 | 126.98 (19) |
| O3—N2—C4 | 117.8 (2) | O7—C7—C8 | 111.41 (17) |
| O4—N2—C4 | 118.1 (2) | C9—C8—C13 | 120.8 (2) |
| O5—N3—O6 | 125.4 (2) | C9—C8—C7 | 122.8 (2) |
| O5—N3—C6 | 118.0 (2) | C13—C8—C7 | 116.42 (19) |
| O6—N3—C6 | 116.5 (2) | C8—C9—C10 | 118.9 (2) |
| O7—C1—C6 | 118.96 (19) | C8—C9—H9 | 120.6 |
| O7—C1—C2 | 123.38 (19) | C10—C9—H9 | 120.6 |
| C6—C1—C2 | 117.32 (18) | C11—C10—C9 | 121.0 (2) |
| C3—C2—C1 | 121.4 (2) | C11—C10—H10 | 119.5 |
| C3—C2—N1 | 116.9 (2) | C9—C10—H10 | 119.5 |
| C1—C2—N1 | 121.65 (19) | C10—C11—C12 | 119.1 (2) |
| C4—C3—C2 | 118.0 (2) | C10—C11—H11 | 120.4 |
| C4—C3—H3 | 121.0 | C12—C11—H11 | 120.4 |
| C2—C3—H3 | 121.0 | C13—C12—C11 | 121.4 (2) |
| C5—C4—C3 | 123.1 (2) | C13—C12—Br1 | 118.90 (17) |
| C5—C4—N2 | 117.8 (2) | C11—C12—Br1 | 119.68 (16) |
| C3—C4—N2 | 119.1 (2) | C12—C13—C8 | 118.8 (2) |
| C4—C5—C6 | 117.0 (2) | C12—C13—H13 | 120.6 |
| C4—C5—H5 | 121.5 | C8—C13—H13 | 120.6 |
| C6—C5—H5 | 121.5 | ||
| C7—O7—C1—C6 | −100.4 (2) | C2—C1—C6—C5 | −0.1 (3) |
| C7—O7—C1—C2 | 86.5 (3) | O7—C1—C6—N3 | 6.8 (3) |
| O7—C1—C2—C3 | 175.27 (19) | C2—C1—C6—N3 | −179.71 (19) |
| C6—C1—C2—C3 | 2.0 (3) | O5—N3—C6—C5 | 54.2 (3) |
| O7—C1—C2—N1 | −3.6 (3) | O6—N3—C6—C5 | −123.6 (2) |
| C6—C1—C2—N1 | −176.81 (19) | O5—N3—C6—C1 | −126.1 (2) |
| O1—N1—C2—C3 | 161.2 (2) | O6—N3—C6—C1 | 56.0 (3) |
| O2—N1—C2—C3 | −19.6 (3) | C1—O7—C7—O8 | 3.6 (3) |
| O1—N1—C2—C1 | −19.9 (3) | C1—O7—C7—C8 | −176.60 (18) |
| O2—N1—C2—C1 | 159.3 (2) | O8—C7—C8—C9 | −159.4 (2) |
| C1—C2—C3—C4 | −1.6 (3) | O7—C7—C8—C9 | 20.8 (3) |
| N1—C2—C3—C4 | 177.32 (19) | O8—C7—C8—C13 | 19.8 (3) |
| C2—C3—C4—C5 | −0.9 (3) | O7—C7—C8—C13 | −159.95 (19) |
| C2—C3—C4—N2 | 178.70 (19) | C13—C8—C9—C10 | −1.3 (4) |
| O3—N2—C4—C5 | −175.1 (3) | C7—C8—C9—C10 | 177.9 (2) |
| O4—N2—C4—C5 | 3.3 (3) | C8—C9—C10—C11 | 1.1 (4) |
| O3—N2—C4—C3 | 5.3 (4) | C9—C10—C11—C12 | −0.1 (4) |
| O4—N2—C4—C3 | −176.3 (2) | C10—C11—C12—C13 | −0.9 (4) |
| C3—C4—C5—C6 | 2.7 (3) | C10—C11—C12—Br1 | 178.1 (2) |
| N2—C4—C5—C6 | −176.87 (19) | C11—C12—C13—C8 | 0.7 (3) |
| C4—C5—C6—C1 | −2.2 (3) | Br1—C12—C13—C8 | −178.21 (16) |
| C4—C5—C6—N3 | 177.4 (2) | C9—C8—C13—C12 | 0.4 (3) |
| O7—C1—C6—C5 | −173.62 (19) | C7—C8—C13—C12 | −178.9 (2) |
| H··· | ||||
| C5—H5···O4i | 0.93 | 2.51 | 3.140 (3) | 125 |
| C11—H11···O6ii | 0.93 | 2.46 | 3.282 (3) | 148 |
| C13—H13···O3iii | 0.93 | 2.40 | 3.314 (3) | 166 |
| C3—H3···O8iv | 0.93 | 2.46 | 3.391 (3) | 175 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C5—H5⋯O4i | 0.93 | 2.51 | 3.140 (3) | 125 |
| C11—H11⋯O6ii | 0.93 | 2.46 | 3.282 (3) | 148 |
| C13—H13⋯O3iii | 0.93 | 2.40 | 3.314 (3) | 166 |
| C3—H3⋯O8iv | 0.93 | 2.46 | 3.391 (3) | 175 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .