Literature DB >> 24940247

7,7-[Ethane-1,2-diylbis(oxy)]-2-[hydroxy(phenyl)methyl]bicyclo[3.3.1]nonan-3-one.

Jian Li1, Jia Qi Ma1, Wei Min Mo1, Zhen Lu Shen1.   

Abstract

In the title compound, C18H22O4, the cyclo-hexane and cyclo-hexa-none rings adopt normal chair and half-chair conformations, respectively. The dioxolane ring is almost planar, with an r.m.s. deviation of 0.094 (3) Å. In the crystal, mol-ecules are connected by O-H⋯O hydrogen bonds, forming 21 helical chains along the a-axis direction. The chains are further connected by C-H⋯O hydrogen bonds.

Entities:  

Year:  2014        PMID: 24940247      PMCID: PMC4051080          DOI: 10.1107/S1600536814009040

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures having condensed cyclo­hexa­none rings, see: Li et al. (2002 ▶); Lopez-Alvarado et al. (2002 ▶). For a related structure with a cyclo­hexa­none ring, see: Shallard-Brown et al. (2005 ▶). For the synthesis, see: Tomizawa et al. (2009 ▶).

Experimental

Crystal data

C18H22O4 M = 302.36 Orthorhombic, a = 9.1465 (3) Å b = 10.0346 (4) Å c = 16.6469 (6) Å V = 1527.88 (10) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.35 × 0.30 × 0.29 mm

Data collection

Bruker SMART CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.951, T max = 0.962 12383 measured reflections 1734 independent reflections 1560 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.096 S = 1.03 1734 reflections 203 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814009040/is5345sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009040/is5345Isup2.hkl CCDC reference: 998726 Additional supporting information: crystallographic information; 3D view; checkCIF report
C18H22O4Dx = 1.314 Mg m3
Mr = 302.36Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 1165 reflections
a = 9.1465 (3) Åθ = 2.4–24.4°
b = 10.0346 (4) ŵ = 0.09 mm1
c = 16.6469 (6) ÅT = 293 K
V = 1527.88 (10) Å3Prism, colorless
Z = 40.35 × 0.30 × 0.29 mm
F(000) = 648
Bruker SMART CCD area detector diffractometer1734 independent reflections
Radiation source: fine-focus sealed tube1560 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
φ and ω scansθmax = 26.0°, θmin = 3.3°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −10→11
Tmin = 0.951, Tmax = 0.962k = −12→12
12383 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0446P)2 + 0.4409P] where P = (Fo2 + 2Fc2)/3
1734 reflections(Δ/σ)max < 0.001
203 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.17 e Å3
Experimental. IR (KBr) 3488, 2929, 2901, 2875, 1685, 1455, 1332, 1268, 1215, 1145, 1094, 1072, 1044, 1024, 948, 715 cm-1. 1NMR (CDCl3) 7.28–7.39 (m, 5H), 4.68–4.70(m, 1H), 3.92–3.95(m, 2H), 3.89 (d, J = 1.5 Hz, 1H), 3.80–3.87 (m, 2H), 2.59–2.63 (m, 2H), 2.51–2.55 (m, 2H), 1.96 (s, 1H), 1.80–1.83 (m, 3H), 1.64–1.67 (m, 1H), 1.52–1.57 (m, 2H) p.p.m.. 13CNMR (CDCl3) 213.2, 141.3, 128.6, 128.2, 127.1, 107.3, 74.6, 64.4, 63.4, 60.1, 45.1, 41.0, 40.1, 30.5, 29.2, 28.4 p.p.m..
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6491 (3)0.0825 (2)0.69986 (12)0.0753 (7)
O20.5859 (3)−0.1011 (2)0.62676 (11)0.0652 (6)
O30.4901 (2)−0.27188 (15)0.47755 (10)0.0465 (5)
O40.1336 (2)−0.00830 (19)0.44707 (11)0.0497 (5)
C10.6058 (3)0.0396 (3)0.62152 (15)0.0506 (7)
C20.7289 (3)0.0663 (3)0.56347 (16)0.0496 (7)
H2A0.80890.00590.57520.060*
H2B0.76400.15650.57170.060*
C30.6849 (3)0.0497 (3)0.47526 (15)0.0454 (6)
H30.76580.08220.44200.054*
C40.5513 (3)0.1339 (3)0.45651 (16)0.0484 (6)
H4A0.52620.12530.40010.058*
H4B0.57200.22690.46750.058*
C50.4239 (3)0.0869 (2)0.50846 (16)0.0428 (6)
H50.33920.14330.49650.051*
C60.4659 (3)0.1088 (3)0.59727 (17)0.0550 (7)
H6A0.47640.20370.60690.066*
H6B0.38690.07670.63100.066*
C70.6542 (3)−0.0947 (3)0.45113 (15)0.0431 (6)
H7A0.6618−0.10100.39310.052*
H7B0.7305−0.15030.47380.052*
C80.5093 (3)−0.1518 (2)0.47572 (13)0.0351 (5)
C90.3807 (3)−0.0595 (2)0.49186 (13)0.0340 (5)
H90.3354−0.09190.54150.041*
C100.6360 (6)−0.0235 (4)0.75276 (19)0.0986 (15)
H10A0.5687−0.00130.79580.118*
H10B0.7303−0.04480.77620.118*
C110.5806 (4)−0.1374 (4)0.70659 (17)0.0695 (10)
H11A0.6407−0.21550.71600.083*
H11B0.4809−0.15780.72220.083*
C120.2635 (2)−0.0783 (2)0.42468 (14)0.0361 (5)
H120.2395−0.17340.42200.043*
C130.3099 (2)−0.0343 (2)0.34160 (13)0.0351 (5)
C140.3927 (3)−0.1185 (3)0.29428 (14)0.0445 (6)
H140.4169−0.20280.31330.053*
C150.4402 (3)−0.0792 (3)0.21877 (16)0.0559 (7)
H150.4965−0.13690.18780.067*
C160.4044 (3)0.0444 (3)0.18965 (17)0.0598 (8)
H160.43620.07090.13910.072*
C170.3212 (3)0.1284 (3)0.23589 (17)0.0541 (7)
H170.29680.21230.21630.065*
C180.2731 (3)0.0903 (3)0.31126 (15)0.0437 (6)
H180.21610.14810.34170.052*
H40.078 (4)−0.061 (4)0.474 (2)0.085 (12)*
U11U22U33U12U13U23
O10.1027 (18)0.0848 (16)0.0384 (10)−0.0320 (15)−0.0114 (11)−0.0115 (11)
O20.1016 (17)0.0530 (12)0.0411 (10)−0.0264 (12)−0.0194 (11)0.0094 (9)
O30.0556 (11)0.0299 (9)0.0539 (10)0.0049 (8)−0.0135 (9)−0.0010 (8)
O40.0375 (9)0.0539 (12)0.0576 (11)0.0058 (9)0.0073 (9)0.0130 (9)
C10.0665 (18)0.0489 (15)0.0363 (12)−0.0176 (14)−0.0052 (12)−0.0066 (11)
C20.0489 (15)0.0500 (15)0.0500 (14)−0.0117 (13)−0.0108 (12)−0.0009 (12)
C30.0436 (13)0.0515 (15)0.0411 (12)−0.0118 (12)0.0011 (11)0.0048 (12)
C40.0596 (15)0.0357 (13)0.0499 (14)−0.0120 (12)−0.0102 (12)0.0089 (11)
C50.0437 (13)0.0309 (12)0.0538 (14)0.0018 (11)−0.0048 (11)−0.0021 (11)
C60.0579 (17)0.0506 (16)0.0564 (16)−0.0087 (14)0.0072 (13)−0.0189 (13)
C70.0390 (13)0.0511 (15)0.0391 (12)0.0030 (12)−0.0009 (10)−0.0044 (11)
C80.0421 (12)0.0352 (12)0.0281 (10)0.0014 (10)−0.0074 (10)0.0013 (9)
C90.0390 (12)0.0311 (11)0.0320 (10)−0.0010 (10)0.0005 (9)0.0025 (9)
C100.128 (4)0.126 (4)0.0412 (16)−0.041 (3)−0.009 (2)0.002 (2)
C110.082 (2)0.079 (2)0.0473 (16)0.022 (2)0.0053 (16)0.0114 (16)
C120.0329 (12)0.0333 (12)0.0422 (12)−0.0030 (10)−0.0008 (10)0.0050 (10)
C130.0329 (12)0.0359 (12)0.0365 (11)−0.0049 (10)−0.0065 (9)0.0017 (10)
C140.0470 (14)0.0447 (14)0.0420 (12)0.0035 (12)−0.0029 (11)−0.0007 (11)
C150.0582 (17)0.0692 (19)0.0403 (14)0.0010 (16)0.0036 (12)−0.0045 (14)
C160.0600 (18)0.080 (2)0.0393 (13)−0.0102 (17)0.0024 (13)0.0139 (15)
C170.0601 (17)0.0504 (16)0.0518 (15)−0.0063 (14)−0.0077 (13)0.0182 (13)
C180.0473 (14)0.0395 (13)0.0445 (13)−0.0006 (11)−0.0043 (11)0.0046 (11)
O1—C101.386 (4)C7—H7A0.9700
O1—C11.429 (3)C7—H7B0.9700
O2—C111.379 (3)C8—C91.521 (3)
O2—C11.425 (3)C9—C121.561 (3)
O3—C81.218 (3)C9—H90.9800
O4—C121.430 (3)C10—C111.467 (5)
O4—H40.86 (4)C10—H10A0.9700
C1—C21.508 (4)C10—H10B0.9700
C1—C61.511 (4)C11—H11A0.9700
C2—C31.532 (4)C11—H11B0.9700
C2—H2A0.9700C12—C131.513 (3)
C2—H2B0.9700C12—H120.9800
C3—C41.518 (4)C13—C141.381 (3)
C3—C71.529 (4)C13—C181.390 (3)
C3—H30.9800C14—C151.387 (4)
C4—C51.526 (4)C14—H140.9300
C4—H4A0.9700C15—C161.371 (4)
C4—H4B0.9700C15—H150.9300
C5—C61.543 (4)C16—C171.372 (4)
C5—C91.546 (3)C16—H160.9300
C5—H50.9800C17—C181.384 (4)
C6—H6A0.9700C17—H170.9300
C6—H6B0.9700C18—H180.9300
C7—C81.500 (3)
C10—O1—C1108.9 (2)O3—C8—C7120.8 (2)
C11—O2—C1109.0 (2)O3—C8—C9119.1 (2)
C12—O4—H4109 (2)C7—C8—C9119.91 (19)
O2—C1—O1106.1 (2)C8—C9—C5114.35 (19)
O2—C1—C2108.1 (2)C8—C9—C12109.31 (18)
O1—C1—C2108.9 (2)C5—C9—C12114.77 (18)
O2—C1—C6111.3 (2)C8—C9—H9105.9
O1—C1—C6109.9 (2)C5—C9—H9105.9
C2—C1—C6112.3 (2)C12—C9—H9105.9
C1—C2—C3113.5 (2)O1—C10—C11107.1 (3)
C1—C2—H2A108.9O1—C10—H10A110.3
C3—C2—H2A108.9C11—C10—H10A110.3
C1—C2—H2B108.9O1—C10—H10B110.3
C3—C2—H2B108.9C11—C10—H10B110.3
H2A—C2—H2B107.7H10A—C10—H10B108.5
C4—C3—C7109.0 (2)O2—C11—C10106.7 (3)
C4—C3—C2110.3 (2)O2—C11—H11A110.4
C7—C3—C2113.8 (2)C10—C11—H11A110.4
C4—C3—H3107.8O2—C11—H11B110.4
C7—C3—H3107.8C10—C11—H11B110.4
C2—C3—H3107.8H11A—C11—H11B108.6
C3—C4—C5109.0 (2)O4—C12—C13109.15 (19)
C3—C4—H4A109.9O4—C12—C9108.93 (19)
C5—C4—H4A109.9C13—C12—C9115.27 (18)
C3—C4—H4B109.9O4—C12—H12107.7
C5—C4—H4B109.9C13—C12—H12107.7
H4A—C4—H4B108.3C9—C12—H12107.7
C4—C5—C6108.0 (2)C14—C13—C18118.4 (2)
C4—C5—C9112.8 (2)C14—C13—C12119.8 (2)
C6—C5—C9111.7 (2)C18—C13—C12121.8 (2)
C4—C5—H5108.1C13—C14—C15121.0 (3)
C6—C5—H5108.1C13—C14—H14119.5
C9—C5—H5108.1C15—C14—H14119.5
C1—C6—C5113.7 (2)C16—C15—C14120.1 (3)
C1—C6—H6A108.8C16—C15—H15119.9
C5—C6—H6A108.8C14—C15—H15119.9
C1—C6—H6B108.8C15—C16—C17119.4 (3)
C5—C6—H6B108.8C15—C16—H16120.3
H6A—C6—H6B107.7C17—C16—H16120.3
C8—C7—C3116.9 (2)C16—C17—C18121.0 (3)
C8—C7—H7A108.1C16—C17—H17119.5
C3—C7—H7A108.1C18—C17—H17119.5
C8—C7—H7B108.1C17—C18—C13120.1 (3)
C3—C7—H7B108.1C17—C18—H18119.9
H7A—C7—H7B107.3C13—C18—H18119.9
C11—O2—C1—O114.4 (4)O3—C8—C9—C12−64.0 (3)
C11—O2—C1—C2131.1 (3)C7—C8—C9—C12110.9 (2)
C11—O2—C1—C6−105.2 (3)C4—C5—C9—C837.9 (3)
C10—O1—C1—O2−8.1 (4)C6—C5—C9—C8−83.9 (3)
C10—O1—C1—C2−124.2 (3)C4—C5—C9—C12−89.6 (2)
C10—O1—C1—C6112.4 (3)C6—C5—C9—C12148.6 (2)
O2—C1—C2—C376.3 (3)C1—O1—C10—C11−0.8 (5)
O1—C1—C2—C3−168.8 (2)C1—O2—C11—C10−14.8 (4)
C6—C1—C2—C3−46.9 (3)O1—C10—C11—O29.6 (5)
C1—C2—C3—C453.7 (3)C8—C9—C12—O4170.56 (19)
C1—C2—C3—C7−69.2 (3)C5—C9—C12—O4−59.4 (3)
C7—C3—C4—C564.1 (3)C8—C9—C12—C13−66.4 (2)
C2—C3—C4—C5−61.5 (3)C5—C9—C12—C1363.6 (3)
C3—C4—C5—C662.2 (3)O4—C12—C13—C14−154.8 (2)
C3—C4—C5—C9−61.7 (3)C9—C12—C13—C1482.3 (3)
O2—C1—C6—C5−72.3 (3)O4—C12—C13—C1826.0 (3)
O1—C1—C6—C5170.5 (2)C9—C12—C13—C18−96.9 (3)
C2—C1—C6—C549.1 (3)C18—C13—C14—C151.1 (4)
C4—C5—C6—C1−56.8 (3)C12—C13—C14—C15−178.2 (2)
C9—C5—C6—C167.8 (3)C13—C14—C15—C16−0.5 (4)
C4—C3—C7—C8−45.7 (3)C14—C15—C16—C170.0 (4)
C2—C3—C7—C877.9 (3)C15—C16—C17—C180.0 (4)
C3—C7—C8—O3−161.2 (2)C16—C17—C18—C130.6 (4)
C3—C7—C8—C924.0 (3)C14—C13—C18—C17−1.1 (4)
O3—C8—C9—C5165.8 (2)C12—C13—C18—C17178.1 (2)
C7—C8—C9—C5−19.3 (3)
D—H···AD—HH···AD···AD—H···A
O4—H4···O3i0.86 (4)2.03 (4)2.857 (3)163 (3)
C16—H16···O3ii0.932.593.473 (4)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O4—H4⋯O3i 0.86 (4)2.03 (4)2.857 (3)163 (3)
C16—H16⋯O3ii 0.932.593.473 (4)159

Symmetry codes: (i) ; (ii) .

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