Literature DB >> 24940242

2-(2-Fluoro-phen-yl)-5-iodo-7-methyl-3-methyl-sulfinyl-1-benzo-furan.

Hong Dae Choi1, Uk Lee2.   

Abstract

In the title compound, C16H12FIO2S, the dihedral angle between the plane of the benzo-furan ring system (r.m.s. deviation = 0.023 Å) and that of the 2-fluoro-phenyl ring is 39.78 (7)°. In the crystal, mol-ecules are linked via pairs of I⋯π contacts [3.812 (2) Å] and a π-π inter-action between the benzene rings of neighbouring mol-ecules [centroid-centroid distance = 3.821 (2) Å] into inversion dimers. These dimers are further linked by π-π inter-actions between the furan and benzene rings of neighbouring mol-ecules [centroid-centroid distance = 3.668 (2) Å]. The mol-ecules stack along the a-axis direction. In addition, C-H⋯O hydrogen bonds are observed between inversion-related dimers.

Entities:  

Year:  2014        PMID: 24940242      PMCID: PMC4051089          DOI: 10.1107/S1600536814010459

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information and the crystal structures of related compounds, see: Choi et al. (2010 ▶, 2012 ▶, 2014 ▶).

Experimental

Crystal data

C16H12FIO2S M = 414.22 Monoclinic, a = 7.9460 (2) Å b = 24.1545 (7) Å c = 7.9685 (2) Å β = 100.997 (1)° V = 1501.32 (7) Å3 Z = 4 Mo Kα radiation μ = 2.28 mm−1 T = 173 K 0.42 × 0.40 × 0.13 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.541, T max = 0.746 14688 measured reflections 3721 independent reflections 3465 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.059 S = 1.12 3721 reflections 192 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.56 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814010459/hb7228sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814010459/hb7228Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814010459/hb7228Isup3.cml CCDC reference: 1001669 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H12FIO2SF(000) = 808
Mr = 414.22Dx = 1.833 Mg m3
Monoclinic, P21/cMelting point = 470–469 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 7.9460 (2) ÅCell parameters from 8240 reflections
b = 24.1545 (7) Åθ = 2.6–28.3°
c = 7.9685 (2) ŵ = 2.28 mm1
β = 100.997 (1)°T = 173 K
V = 1501.32 (7) Å3Block, colourless
Z = 40.42 × 0.40 × 0.13 mm
Bruker SMART APEXII CCD diffractometer3721 independent reflections
Radiation source: rotating anode3465 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.025
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 1.7°
φ and ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −32→27
Tmin = 0.541, Tmax = 0.746l = −10→10
14688 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: difference Fourier map
wR(F2) = 0.059H-atom parameters constrained
S = 1.12w = 1/[σ2(Fo2) + (0.0242P)2 + 1.1461P] where P = (Fo2 + 2Fc2)/3
3721 reflections(Δ/σ)max = 0.002
192 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.56 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.836495 (19)0.586239 (6)1.028521 (19)0.02707 (6)
S10.69187 (7)0.33626 (2)0.73135 (7)0.02286 (12)
F10.54937 (17)0.31240 (6)0.36409 (19)0.0312 (3)
O10.31221 (18)0.43857 (6)0.56014 (19)0.0199 (3)
O20.8687 (2)0.35305 (8)0.7161 (2)0.0339 (4)
C10.5544 (3)0.39339 (9)0.6766 (3)0.0202 (4)
C20.5700 (3)0.44971 (9)0.7398 (3)0.0194 (4)
C30.6952 (3)0.48077 (9)0.8473 (3)0.0221 (4)
H30.80190.46510.89980.026*
C40.6553 (3)0.53565 (9)0.8730 (3)0.0214 (4)
C50.4976 (3)0.55926 (9)0.7989 (3)0.0223 (4)
H50.47640.59700.82150.027*
C60.3717 (3)0.52899 (9)0.6932 (3)0.0203 (4)
C70.4166 (3)0.47492 (9)0.6656 (3)0.0192 (4)
C80.4009 (3)0.38961 (9)0.5680 (3)0.0195 (4)
C90.1982 (3)0.55220 (10)0.6186 (3)0.0284 (5)
H9A0.17310.54560.49500.043*
H9B0.19730.59210.64080.043*
H9C0.11100.53400.67130.043*
C100.3059 (3)0.34517 (9)0.4659 (3)0.0205 (4)
C110.3805 (3)0.30761 (9)0.3698 (3)0.0240 (4)
C120.2887 (3)0.26551 (10)0.2777 (3)0.0311 (5)
H120.34330.24030.21380.037*
C130.1158 (3)0.26053 (11)0.2799 (3)0.0336 (6)
H130.05150.23100.22010.040*
C140.0361 (3)0.29845 (11)0.3690 (3)0.0298 (5)
H14−0.08360.29570.36690.036*
C150.1300 (3)0.34039 (10)0.4610 (3)0.0234 (4)
H150.07410.36630.52150.028*
C160.6912 (4)0.33410 (12)0.9561 (3)0.0344 (6)
H16A0.76730.30441.00920.052*
H16B0.57450.32700.97400.052*
H16C0.73150.36961.00810.052*
U11U22U33U12U13U23
I10.02576 (9)0.02477 (9)0.02996 (9)−0.00501 (5)0.00348 (6)−0.00525 (6)
S10.0252 (3)0.0190 (3)0.0238 (3)0.0066 (2)0.0033 (2)−0.0005 (2)
F10.0262 (7)0.0334 (8)0.0364 (8)0.0013 (6)0.0118 (6)−0.0074 (6)
O10.0192 (7)0.0182 (8)0.0213 (7)0.0021 (6)0.0018 (6)−0.0012 (6)
O20.0231 (8)0.0399 (10)0.0395 (10)0.0096 (7)0.0082 (7)0.0036 (8)
C10.0203 (10)0.0188 (10)0.0218 (10)0.0031 (8)0.0044 (8)−0.0002 (8)
C20.0205 (10)0.0174 (10)0.0209 (10)0.0010 (8)0.0050 (8)0.0005 (8)
C30.0200 (10)0.0214 (11)0.0242 (11)0.0012 (8)0.0028 (8)−0.0002 (8)
C40.0227 (10)0.0211 (11)0.0209 (10)−0.0032 (8)0.0050 (8)−0.0011 (8)
C50.0268 (11)0.0162 (10)0.0252 (11)0.0006 (8)0.0085 (9)−0.0002 (8)
C60.0212 (10)0.0192 (10)0.0214 (10)0.0036 (8)0.0060 (8)0.0025 (8)
C70.0189 (10)0.0200 (11)0.0192 (10)0.0000 (8)0.0049 (8)−0.0010 (8)
C80.0209 (10)0.0185 (10)0.0193 (10)0.0034 (8)0.0050 (8)0.0002 (8)
C90.0245 (11)0.0232 (12)0.0362 (13)0.0075 (9)0.0026 (10)0.0011 (9)
C100.0236 (10)0.0185 (11)0.0183 (10)0.0005 (8)0.0011 (8)0.0013 (8)
C110.0259 (11)0.0233 (12)0.0231 (11)0.0014 (9)0.0052 (9)−0.0010 (8)
C120.0400 (14)0.0257 (13)0.0286 (12)−0.0016 (10)0.0089 (10)−0.0084 (9)
C130.0404 (14)0.0299 (13)0.0289 (12)−0.0116 (11)0.0026 (10)−0.0069 (10)
C140.0257 (11)0.0348 (14)0.0279 (12)−0.0066 (10)0.0024 (9)0.0000 (10)
C150.0232 (10)0.0235 (11)0.0231 (11)0.0006 (8)0.0039 (8)0.0006 (8)
C160.0433 (14)0.0357 (14)0.0246 (12)0.0091 (11)0.0077 (10)0.0058 (10)
I1—C42.102 (2)C8—C101.466 (3)
S1—O21.4898 (18)C9—H9A0.9800
S1—C11.763 (2)C9—H9B0.9800
S1—C161.793 (2)C9—H9C0.9800
F1—C111.356 (3)C10—C111.391 (3)
O1—C81.372 (3)C10—C151.396 (3)
O1—C71.378 (2)C11—C121.379 (3)
C1—C81.357 (3)C12—C131.383 (4)
C1—C21.448 (3)C12—H120.9500
C2—C71.389 (3)C13—C141.384 (4)
C2—C31.400 (3)C13—H130.9500
C3—C41.387 (3)C14—C151.383 (3)
C3—H30.9500C14—H140.9500
C4—C51.401 (3)C15—H150.9500
C5—C61.387 (3)C16—H16A0.9800
C5—H50.9500C16—H16B0.9800
C6—C71.383 (3)C16—H16C0.9800
C6—C91.502 (3)
O2—S1—C1108.46 (10)C6—C9—H9B109.5
O2—S1—C16105.79 (12)H9A—C9—H9B109.5
C1—S1—C1698.65 (11)C6—C9—H9C109.5
C8—O1—C7106.08 (16)H9A—C9—H9C109.5
C8—C1—C2106.99 (18)H9B—C9—H9C109.5
C8—C1—S1122.98 (17)C11—C10—C15117.4 (2)
C2—C1—S1129.91 (16)C11—C10—C8123.7 (2)
C7—C2—C3119.2 (2)C15—C10—C8118.9 (2)
C7—C2—C1104.70 (18)F1—C11—C12118.1 (2)
C3—C2—C1136.0 (2)F1—C11—C10119.4 (2)
C4—C3—C2116.5 (2)C12—C11—C10122.4 (2)
C4—C3—H3121.7C11—C12—C13118.9 (2)
C2—C3—H3121.7C11—C12—H12120.5
C3—C4—C5122.5 (2)C13—C12—H12120.5
C3—C4—I1119.52 (16)C12—C13—C14120.1 (2)
C5—C4—I1117.95 (16)C12—C13—H13119.9
C6—C5—C4121.7 (2)C14—C13—H13119.9
C6—C5—H5119.2C15—C14—C13120.2 (2)
C4—C5—H5119.2C15—C14—H14119.9
C7—C6—C5114.60 (19)C13—C14—H14119.9
C7—C6—C9122.3 (2)C14—C15—C10120.8 (2)
C5—C6—C9123.0 (2)C14—C15—H15119.6
O1—C7—C6123.72 (19)C10—C15—H15119.6
O1—C7—C2110.94 (18)S1—C16—H16A109.5
C6—C7—C2125.3 (2)S1—C16—H16B109.5
C1—C8—O1111.24 (18)H16A—C16—H16B109.5
C1—C8—C10135.1 (2)S1—C16—H16C109.5
O1—C8—C10113.59 (17)H16A—C16—H16C109.5
C6—C9—H9A109.5H16B—C16—H16C109.5
O2—S1—C1—C8132.80 (19)C3—C2—C7—C6−2.5 (3)
C16—S1—C1—C8−117.3 (2)C1—C2—C7—C6178.2 (2)
O2—S1—C1—C2−51.8 (2)C2—C1—C8—O1−2.2 (2)
C16—S1—C1—C258.1 (2)S1—C1—C8—O1174.07 (15)
C8—C1—C2—C72.1 (2)C2—C1—C8—C10−178.3 (2)
S1—C1—C2—C7−173.83 (18)S1—C1—C8—C10−2.0 (4)
C8—C1—C2—C3−177.0 (2)C7—O1—C8—C11.4 (2)
S1—C1—C2—C37.0 (4)C7—O1—C8—C10178.36 (17)
C7—C2—C3—C40.4 (3)C1—C8—C10—C11−44.0 (4)
C1—C2—C3—C4179.5 (2)O1—C8—C10—C11140.0 (2)
C2—C3—C4—C51.0 (3)C1—C8—C10—C15137.3 (3)
C2—C3—C4—I1−178.86 (15)O1—C8—C10—C15−38.6 (3)
C3—C4—C5—C6−0.6 (3)C15—C10—C11—F1176.76 (19)
I1—C4—C5—C6179.31 (16)C8—C10—C11—F1−1.9 (3)
C4—C5—C6—C7−1.3 (3)C15—C10—C11—C12−2.6 (3)
C4—C5—C6—C9176.9 (2)C8—C10—C11—C12178.7 (2)
C8—O1—C7—C6−179.5 (2)F1—C11—C12—C13−179.0 (2)
C8—O1—C7—C20.0 (2)C10—C11—C12—C130.4 (4)
C5—C6—C7—O1−177.70 (19)C11—C12—C13—C142.0 (4)
C9—C6—C7—O14.1 (3)C12—C13—C14—C15−2.2 (4)
C5—C6—C7—C22.9 (3)C13—C14—C15—C10−0.1 (4)
C9—C6—C7—C2−175.3 (2)C11—C10—C15—C142.5 (3)
C3—C2—C7—O1178.00 (18)C8—C10—C15—C14−178.8 (2)
C1—C2—C7—O1−1.3 (2)
D—H···AD—HH···AD···AD—H···A
C13—H13···O2i0.952.493.355 (3)151
C15—H15···O2ii0.952.483.185 (3)131
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C13—H13⋯O2i 0.952.493.355 (3)151
C15—H15⋯O2ii 0.952.483.185 (3)131

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(4-Fluoro-phen-yl)-5-iodo-7-methyl-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16

3.  2-(3-Fluoro-phen-yl)-5-iodo-7-methyl-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-05

4.  5-Iodo-7-methyl-2-(4-methyl-phen-yl)-3-methyl-sulfinyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-22
  4 in total

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