Literature DB >> 24940207

Di-aqua-bis-(ethyl-enedi-amine-κ(2) N,N')copper(II) bis-(sulfamerazinate).

Amani Direm1, Wahiba Falek1, Guillaume Pilet2, Nourredine Benali-Cherif1.   

Abstract

The asymmetric unit of the title compound, [Cu(C2H8N2)2(H2O)2](C11H11N4O2S)2, contains one sulfamerazinate anion in a general position and one half-cation that is located on a center of inversion. The Cu(II) cation shows a strong Jahn-Teller distortion. It is coordinated by four N atoms of two ethyl-enedi-amine ligands in the basal plane and two O atoms at much longer distances in the axial positions in a bipyramidal coordination. In the crystal, the building blocks are connected by N-H⋯N, O-H⋯N, N-H⋯O and O-H⋯O hydrogen bonding into a two-dimensional network parallel to (001).

Entities:  

Year:  2014        PMID: 24940207      PMCID: PMC4051046          DOI: 10.1107/S160053681401068X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the anti­bacterial activity of sulfonamides, see: Anand (1980 ▶); Kratz et al. (2000 ▶); Grave et al. (2010 ▶). For uses of sulfamerazine, see: Murphy et al. (1943 ▶); Clark et al. (1943 ▶); Earle (1944 ▶); Forbes et al. (1946 ▶). The crystal structure of sulfamerazine was reported by Acharya et al. (1982 ▶). For a related compound in which sulfa­thia­zole acts as a deproton­ated counter-ion, see: Anacona et al. (2002 ▶).

Experimental

Crystal data

[Cu(C2H8N2)2(H2O)2](C11H11N4O2S)2 M = 746.41 Triclinic, a = 7.5429 (4) Å b = 8.1800 (5) Å c = 14.8434 (8) Å α = 75.299 (5)° β = 82.800 (5)° γ = 78.873 (5)° V = 866.40 (9) Å3 Z = 1 Mo Kα radiation μ = 0.81 mm−1 T = 293 K 0.41 × 0.36 × 0.17 mm

Data collection

Oxford Diffraction Gemini diffractometer Absorption correction: analytical (de Meulenaer & Tompa, 1965 ▶) T min = 0.723, T max = 0.869 4738 measured reflections 4020 independent reflections 3361 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.097 S = 1.05 4020 reflections 215 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.38 e Å−3 Data collection: GEMINI (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2006 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SIR2004 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S160053681401068X/nc2325sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681401068X/nc2325Isup2.hkl CCDC reference: 1002145 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Cu(C2H8N2)2(H2O)2](C11H11N4O2S)2Z = 1
Mr = 746.41F(000) = 391
Triclinic, P1Dx = 1.431 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71069 Å
a = 7.5429 (4) ÅCell parameters from 3709 reflections
b = 8.1800 (5) Åθ = 3–29°
c = 14.8434 (8) ŵ = 0.81 mm1
α = 75.299 (5)°T = 293 K
β = 82.800 (5)°Block, blue
γ = 78.873 (5)°0.41 × 0.36 × 0.17 mm
V = 866.40 (9) Å3
Oxford Diffraction Gemini diffractometer4020 independent reflections
Radiation source: fine-focus sealed tube3361 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
ω/2θ scansθmax = 29.3°, θmin = 2.9°
Absorption correction: analytical (de Meulenaer & Tompa, 1965)h = −10→7
Tmin = 0.723, Tmax = 0.869k = −9→11
4738 measured reflectionsl = −20→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.097w = 1/[σ2(Fo2) + (0.0359P)2 + 0.4528P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
4020 reflectionsΔρmax = 0.33 e Å3
215 parametersΔρmin = −0.38 e Å3
0 restraints
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems open-flow nitrogen cryostat (Cosier & Glazer, 1986) with a nominal stability of 0.1 K.Cosier, J. & Glazer, A·M., 1986. J. Appl. Cryst. 105–107.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.5000.03130 (12)
S10.93674 (7)0.08503 (7)0.18420 (3)0.03012 (13)
O10.7864 (2)−0.0053 (2)0.18937 (11)0.0387 (4)
O21.0053 (2)0.1546 (2)0.08903 (10)0.0428 (4)
C200.8897 (3)0.5351 (3)0.25274 (16)0.0355 (5)
H200.96150.61890.24510.043*
N130.9256 (2)−0.0906 (2)0.37617 (12)0.0347 (4)
C210.9576 (3)0.3893 (3)0.22151 (15)0.0346 (5)
H211.07430.37590.19240.041*
C160.8532 (3)0.2613 (3)0.23311 (14)0.0291 (4)
O1W0.4227 (2)0.1071 (3)0.14692 (12)0.0552 (5)
C120.9149 (3)−0.1728 (3)0.46614 (16)0.0435 (6)
C111.0858 (3)−0.1138 (3)0.32650 (15)0.0310 (4)
N111.1063 (2)−0.0306 (2)0.23427 (12)0.0325 (4)
N121.2372 (3)−0.2157 (3)0.36031 (14)0.0469 (5)
C150.7356 (4)−0.1427 (5)0.5202 (2)0.0659 (8)
H15A0.6836−0.02350.50290.099*
H15B0.752−0.17510.58580.099*
H15C0.656−0.21020.50660.099*
C131.0634 (4)−0.2794 (4)0.5060 (2)0.0652 (9)
H131.0572−0.33710.56860.078*
C141.2192 (4)−0.2967 (4)0.4501 (2)0.0658 (9)
H141.3198−0.36990.47610.079*
C170.6811 (3)0.2811 (3)0.27905 (14)0.0323 (5)
H170.61230.19420.28950.039*
N140.6421 (3)0.7043 (3)0.32650 (17)0.0488 (5)
C190.7133 (3)0.5595 (3)0.29608 (15)0.0328 (5)
C180.6118 (3)0.4279 (3)0.30924 (15)0.0343 (5)
H180.49550.440.33890.041*
N10.6743 (3)−0.2106 (2)0.05258 (13)0.0382 (4)
H1NA0.7839−0.21930.0110.046*
H1NB0.7067−0.20590.1130.046*
N20.3086 (3)−0.1504 (2)0.04393 (14)0.0394 (4)
H2NA0.2099−0.09530.08020.047*
H2NB0.2601−0.1696−0.00930.047*
C10.5849 (4)−0.3587 (3)0.06228 (18)0.0455 (6)
H1A0.6484−0.45860.10350.055*
H1B0.5857−0.3840.00180.055*
C20.3928 (4)−0.3160 (3)0.10211 (18)0.0476 (6)
H2A0.3254−0.40550.10170.057*
H2B0.3916−0.30710.16610.057*
H14A0.51690.73520.32640.05*
H14B0.70110.8010.31190.05*
H1W0.51010.07950.1820.05*
H2W0.32320.05990.1820.05*
U11U22U33U12U13U23
Cu10.0291 (2)0.0302 (2)0.0334 (2)−0.00225 (15)−0.00634 (15)−0.00569 (15)
S10.0257 (3)0.0345 (3)0.0295 (3)−0.0024 (2)−0.0030 (2)−0.0079 (2)
O10.0305 (8)0.0411 (9)0.0488 (9)−0.0061 (7)−0.0087 (7)−0.0156 (7)
O20.0432 (9)0.0525 (10)0.0277 (8)−0.0025 (8)0.0009 (7)−0.0066 (7)
C200.0292 (11)0.0323 (12)0.0452 (12)−0.0109 (9)−0.0030 (9)−0.0056 (10)
N130.0300 (9)0.0369 (10)0.0354 (10)−0.0041 (8)−0.0007 (8)−0.0071 (8)
C210.0246 (10)0.0390 (12)0.0381 (12)−0.0075 (9)0.0004 (9)−0.0051 (9)
C160.0275 (10)0.0282 (10)0.0294 (10)−0.0025 (8)−0.0047 (8)−0.0035 (8)
O1W0.0365 (9)0.0874 (14)0.0414 (10)−0.0189 (9)−0.0090 (7)−0.0056 (9)
C120.0428 (13)0.0493 (15)0.0367 (12)−0.0103 (11)0.0000 (10)−0.0068 (11)
C110.0270 (10)0.0300 (11)0.0366 (11)−0.0028 (8)−0.0029 (8)−0.0099 (9)
N110.0231 (9)0.0370 (10)0.0342 (9)−0.0004 (7)−0.0007 (7)−0.0066 (8)
N120.0329 (10)0.0558 (13)0.0437 (12)0.0082 (9)−0.0079 (9)−0.0061 (10)
C150.0537 (17)0.087 (2)0.0487 (16)−0.0136 (16)0.0144 (13)−0.0092 (15)
C130.0594 (18)0.082 (2)0.0379 (14)0.0001 (16)−0.0060 (13)0.0082 (14)
C140.0506 (17)0.078 (2)0.0508 (17)0.0136 (15)−0.0142 (13)0.0038 (15)
C170.0303 (11)0.0299 (11)0.0362 (11)−0.0091 (9)−0.0002 (9)−0.0053 (9)
N140.0372 (11)0.0357 (11)0.0781 (15)−0.0080 (9)0.0029 (10)−0.0239 (10)
C190.0316 (11)0.0300 (11)0.0357 (11)−0.0049 (9)−0.0051 (9)−0.0050 (9)
C180.0252 (10)0.0361 (12)0.0397 (12)−0.0047 (9)0.0017 (9)−0.0075 (9)
N10.0359 (10)0.0388 (11)0.0353 (10)0.0005 (8)−0.0066 (8)−0.0037 (8)
N20.0352 (10)0.0417 (11)0.0429 (11)−0.0046 (8)−0.0037 (8)−0.0141 (9)
C10.0549 (15)0.0320 (12)0.0446 (14)−0.0010 (11)−0.0043 (11)−0.0047 (10)
C20.0555 (16)0.0379 (14)0.0468 (14)−0.0136 (12)0.0009 (12)−0.0034 (11)
Cu1—N12.0016 (18)C15—H15B0.96
Cu1—N1i2.0016 (18)C15—H15C0.96
Cu1—N22.0168 (19)C13—C141.357 (4)
Cu1—N2i2.0168 (19)C13—H130.93
S1—O21.4524 (16)C14—H140.93
S1—O11.4530 (16)C17—C181.374 (3)
S1—N111.5806 (17)C17—H170.93
S1—C161.752 (2)N14—C191.364 (3)
C20—C211.373 (3)N14—H14A0.9300
C20—C191.404 (3)N14—H14B0.9500
C20—H200.93C19—C181.399 (3)
N13—C121.334 (3)C18—H180.93
N13—C111.341 (3)N1—C11.465 (3)
C21—C161.393 (3)N1—H1NA0.97
C21—H210.93N1—H1NB0.97
C16—C171.389 (3)N2—C21.481 (3)
O1W—H1W0.8500N2—H2NA0.97
O1W—H2W0.9500N2—H2NB0.97
C12—C131.376 (4)C1—C21.505 (4)
C12—C151.494 (4)C1—H1A0.97
C11—N121.347 (3)C1—H1B0.97
C11—N111.370 (3)C2—H2A0.97
N12—C141.332 (3)C2—H2B0.97
C15—H15A0.96
N1—Cu1—N1i180N12—C14—C13124.2 (2)
N1—Cu1—N285.23 (8)N12—C14—H14117.9
N1i—Cu1—N294.77 (8)C13—C14—H14117.9
N1—Cu1—N2i94.77 (8)C18—C17—C16120.5 (2)
N1i—Cu1—N2i85.23 (8)C18—C17—H17119.7
N2—Cu1—N2i180C16—C17—H17119.7
O2—S1—O1113.23 (10)C19—N14—H14A115.00
O2—S1—N11105.46 (9)C19—N14—H14B122.00
O1—S1—N11113.64 (10)H14A—N14—H14B112.00
O2—S1—C16106.20 (10)N14—C19—C18120.2 (2)
O1—S1—C16106.87 (10)N14—C19—C20122.0 (2)
N11—S1—C16111.27 (10)C18—C19—C20117.8 (2)
C21—C20—C19121.0 (2)C17—C18—C19121.1 (2)
C21—C20—H20119.5C17—C18—H18119.5
C19—C20—H20119.5C19—C18—H18119.5
C12—N13—C11117.89 (19)C1—N1—Cu1107.55 (14)
C20—C21—C16120.5 (2)C1—N1—H1NA110.2
C20—C21—H21119.7Cu1—N1—H1NA110.2
C16—C21—H21119.7C1—N1—H1NB110.2
C17—C16—C21119.0 (2)Cu1—N1—H1NB110.2
C17—C16—S1121.54 (16)H1NA—N1—H1NB108.5
C21—C16—S1119.33 (16)C2—N2—Cu1108.34 (14)
H1W—O1W—H2W107.00C2—N2—H2NA110
N13—C12—C13120.8 (2)Cu1—N2—H2NA110
N13—C12—C15116.8 (2)C2—N2—H2NB110
C13—C12—C15122.4 (2)Cu1—N2—H2NB110
N13—C11—N12124.9 (2)H2NA—N2—H2NB108.4
N13—C11—N11120.69 (18)N1—C1—C2108.2 (2)
N12—C11—N11114.39 (19)N1—C1—H1A110.1
C11—N11—S1119.66 (14)C2—C1—H1A110.1
C14—N12—C11115.0 (2)N1—C1—H1B110.1
C12—C15—H15A109.5C2—C1—H1B110.1
C12—C15—H15B109.5H1A—C1—H1B108.4
H15A—C15—H15B109.5N2—C2—C1108.23 (19)
C12—C15—H15C109.5N2—C2—H2A110.1
H15A—C15—H15C109.5C1—C2—H2A110.1
H15B—C15—H15C109.5N2—C2—H2B110.1
C14—C13—C12117.2 (2)C1—C2—H2B110.1
C14—C13—H13121.4H2A—C2—H2B108.4
C12—C13—H13121.4
C19—C20—C21—C16−0.7 (3)C16—S1—N11—C1164.56 (19)
C20—C21—C16—C17−1.8 (3)N13—C11—N12—C140.1 (4)
C20—C21—C16—S1174.88 (16)N11—C11—N12—C14179.7 (2)
O2—S1—C16—C17129.97 (17)N13—C12—C13—C140.0 (5)
O1—S1—C16—C178.82 (19)C15—C12—C13—C14−179.9 (3)
N11—S1—C16—C17−115.76 (17)C11—N12—C14—C13−1.0 (5)
O2—S1—C16—C21−46.61 (18)C12—C13—C14—N121.0 (5)
O1—S1—C16—C21−167.75 (16)C21—C16—C17—C182.7 (3)
N11—S1—C16—C2167.66 (18)S1—C16—C17—C18−173.90 (16)
C11—N13—C12—C13−0.8 (4)C21—C20—C19—N14−179.1 (2)
C11—N13—C12—C15179.1 (2)C21—C20—C19—C182.2 (3)
C12—N13—C11—N120.8 (3)C16—C17—C18—C19−1.1 (3)
C12—N13—C11—N11−178.8 (2)N14—C19—C18—C17180.0 (2)
N13—C11—N11—S1−3.7 (3)C20—C19—C18—C17−1.3 (3)
N12—C11—N11—S1176.63 (17)Cu1—N1—C1—C2−43.1 (2)
O2—S1—N11—C11179.29 (17)Cu1—N2—C2—C1−35.0 (2)
O1—S1—N11—C11−56.1 (2)N1—C1—C2—N252.3 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1NA···O2ii0.972.093.022 (3)162
O1W—H1W···O10.852.072.816 (2)145
N1—H1NB···O10.972.413.219 (2)140
O1W—H2W···N11iii0.951.922.858 (2)171
N2—H2NA···O2iii0.972.333.189 (3)147
N2—H2NA···N11iii0.972.473.319 (3)145
N2—H2NB···O2i0.972.423.277 (3)147
N14—H14A···N12iv0.932.093.003 (3)166
N14—H14B···O1v0.952.212.993 (3)140
N14—H14B···N13v0.952.443.215 (3)139
C17—H17···O10.932.552.915 (3)104
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1NA⋯O2i 0.972.093.022 (3)162
O1W—H1W⋯O10.852.072.816 (2)145
N1—H1NB⋯O10.972.413.219 (2)140
O1W—H2W⋯N11ii 0.951.922.858 (2)171
N2—H2NA⋯O2ii 0.972.333.189 (3)147
N2—H2NA⋯N11ii 0.972.473.319 (3)145
N2—H2NB⋯O2iii 0.972.423.277 (3)147
N14—H14A⋯N12iv 0.932.093.003 (3)166
N14—H14B⋯O1v 0.952.212.993 (3)140
N14—H14B⋯N13v 0.952.443.215 (3)139

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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