Literature DB >> 24934394

Towards easy and reliable AFM tip shape determination using blind tip reconstruction.

Erin E Flater1, George E Zacharakis-Jutz2, Braulio G Dumba2, Isaac A White2, Charles A Clifford3.   

Abstract

Quantitative determination of the geometry of an atomic force microscope (AFM) probe tip is critical for robust measurements of the nanoscale properties of surfaces, including accurate measurement of sample features and quantification of tribological characteristics. Blind tip reconstruction, which determines tip shape from an AFM image scan without knowledge of tip or sample shape, was established most notably by Villarrubia [J. Res. Natl. Inst. Stand. Tech. 102 (1997)] and has been further developed since that time. Nevertheless, the implementation of blind tip reconstruction for the general user to produce reliable and consistent estimates of tip shape has been hindered due to ambiguity about how to choose the key input parameters, such as tip matrix size and threshold value, which strongly impact the results of the tip reconstruction. These key parameters are investigated here via Villarrubia's blind tip reconstruction algorithms in which we have added the capability for users to systematically vary the key tip reconstruction parameters, evaluate the set of possible tip reconstructions, and determine the optimal tip reconstruction for a given sample. We demonstrate the capabilities of these algorithms through analysis of a set of simulated AFM images and provide practical guidelines for users of the blind tip reconstruction method. We present a reliable method to choose the threshold parameter corresponding to an optimal reconstructed tip shape for a given image. Specifically, we show that the trend in how the reconstructed tip shape varies with threshold number is so regular that the optimal, or Goldilocks, threshold value corresponds with the peak in the derivative of the RMS difference with respect to the zero threshold curve vs. threshold number.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  AFM; Blind tip reconstruction; SPM; Tip characterization; Tip shape

Mesh:

Year:  2013        PMID: 24934394     DOI: 10.1016/j.ultramic.2013.06.022

Source DB:  PubMed          Journal:  Ultramicroscopy        ISSN: 0304-3991            Impact factor:   2.689


  7 in total

1.  Tip characterization method using multi-feature characterizer for CD-AFM.

Authors:  Ndubuisi G Orji; Hiroshi Itoh; Chumei Wang; Ronald G Dixson; Peter S Walecki; Sebastian W Schmidt; Bernd Irmer
Journal:  Ultramicroscopy       Date:  2015-12-09       Impact factor: 2.689

Review 2.  Atomic force microscopy for single molecule characterisation of protein aggregation.

Authors:  Francesco Simone Ruggeri; Tomas Šneideris; Michele Vendruscolo; Tuomas P J Knowles
Journal:  Arch Biochem Biophys       Date:  2019-02-08       Impact factor: 4.013

3.  Replicated Pattern Formation and Recognition Properties of 2,4-Dichlorophenoxyacetic Acid-Imprinted Polymers Using Colloidal Silica Array Molds.

Authors:  Gita Amiria Aya; Jin Chul Yang; Suck Won Hong; Jin Young Park
Journal:  Polymers (Basel)       Date:  2019-08-11       Impact factor: 4.329

4.  Influence of force volume indentation parameters and processing method in wood cell walls nanomechanical studies.

Authors:  Aubin C Normand; Anne M Charrier; Olivier Arnould; Aude L Lereu
Journal:  Sci Rep       Date:  2021-03-11       Impact factor: 4.379

5.  Investigation on blind tip reconstruction errors caused by sample features.

Authors:  Jiahuan Wan; Linyan Xu; Sen Wu; Xiaodong Hu
Journal:  Sensors (Basel)       Date:  2014-12-05       Impact factor: 3.576

6.  Challenges in the size analysis of a silica nanoparticle mixture as candidate certified reference material.

Authors:  Vikram Kestens; Gert Roebben; Jan Herrmann; Åsa Jämting; Victoria Coleman; Caterina Minelli; Charles Clifford; Pieter-Jan De Temmerman; Jan Mast; Liu Junjie; Frank Babick; Helmut Cölfen; Hendrik Emons
Journal:  J Nanopart Res       Date:  2016-06-23       Impact factor: 2.253

7.  Improved Application of Carbon Nanotube Atomic Force Microscopy Probes Using PeakForce Tapping Mode.

Authors:  Ashley D Slattery; Cameron J Shearer; Joseph G Shapter; Adam J Blanch; Jamie S Quinton; Christopher T Gibson
Journal:  Nanomaterials (Basel)       Date:  2018-10-09       Impact factor: 5.076

  7 in total

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