Literature DB >> 24929341

Selective transport control on molecular velcro made from intrinsically disordered proteins.

Kai D Schleicher1, Simon L Dettmer2, Larisa E Kapinos1, Stefano Pagliara2, Ulrich F Keyser2, Sylvia Jeney3, Roderick Y H Lim1.   

Abstract

The selectivity and speed of many biological transport processes transpire from a 'reduction of dimensionality' that confines diffusion to one or two dimensions instead of three. This behaviour remains highly sought after on polymeric surfaces as a means to expedite diffusional search processes in molecular engineered systems. Here, we have reconstituted the two-dimensional diffusion of colloidal particles on a molecular brush surface. The surface is composed of phenylalanine-glycine nucleoporins (FG Nups)--intrinsically disordered proteins that facilitate selective transport through nuclear pore complexes in eukaryotic cells. Local and ensemble-level experiments involving optical trapping using a photonic force microscope and particle tracking by video microscopy, respectively, reveal that 1-µm-sized colloidal particles bearing nuclear transport receptors called karyopherins can exhibit behaviour that varies from highly localized to unhindered two-dimensional diffusion. Particle diffusivity is controlled by varying the amount of free karyopherins in solution, which modulates the multivalency of Kap-binding sites within the molecular brush. We conclude that the FG Nups resemble stimuli-responsive molecular 'velcro', which can impart 'reduction of dimensionality' as a means of biomimetic transport control in artificial environments.

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Year:  2014        PMID: 24929341     DOI: 10.1038/nnano.2014.103

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  28 in total

Review 1.  Translocation through the nuclear pore complex: selectivity and speed by reduction-of-dimensionality.

Authors:  Reiner Peters
Journal:  Traffic       Date:  2005-05       Impact factor: 6.215

2.  Significant proportions of nuclear transport proteins with reduced intracellular mobilities resolved by fluorescence correlation spectroscopy.

Authors:  Allison Paradise; Mikhail K Levin; George Korza; John H Carson
Journal:  J Mol Biol       Date:  2006-10-04       Impact factor: 5.469

3.  Nanomechanical basis of selective gating by the nuclear pore complex.

Authors:  Roderick Y H Lim; Birthe Fahrenkrog; Joachim Köser; Kyrill Schwarz-Herion; Jie Deng; Ueli Aebi
Journal:  Science       Date:  2007-10-04       Impact factor: 47.728

4.  Gradient-driven motion of multivalent ligand molecules along a surface functionalized with multiple receptors.

Authors:  András Perl; Alberto Gomez-Casado; Damien Thompson; Henk H Dam; Pascal Jonkheijm; David N Reinhoudt; Jurriaan Huskens
Journal:  Nat Chem       Date:  2011-03-06       Impact factor: 24.427

5.  Local characterization of hindered Brownian motion by using digital video microscopy and 3D particle tracking.

Authors:  Simon L Dettmer; Ulrich F Keyser; Stefano Pagliara
Journal:  Rev Sci Instrum       Date:  2014-02       Impact factor: 1.523

6.  Monitoring ligand-receptor interactions by photonic force microscopy.

Authors:  Sylvia Jeney; Flavio Mor; Roland Koszali; László Forró; Vincent T Moy
Journal:  Nanotechnology       Date:  2010-06-02       Impact factor: 3.874

7.  Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.

Authors:  Daniel P Denning; Samir S Patel; Vladimir Uversky; Anthony L Fink; Michael Rexach
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

8.  Artificial nanopores that mimic the transport selectivity of the nuclear pore complex.

Authors:  Tijana Jovanovic-Talisman; Jaclyn Tetenbaum-Novatt; Anna Sophia McKenney; Anton Zilman; Reiner Peters; Michael P Rout; Brian T Chait
Journal:  Nature       Date:  2008-12-21       Impact factor: 49.962

9.  Natively unfolded nucleoporins gate protein diffusion across the nuclear pore complex.

Authors:  Samir S Patel; Brian J Belmont; Joshua M Sante; Michael F Rexach
Journal:  Cell       Date:  2007-04-06       Impact factor: 41.582

10.  Nuclear import time and transport efficiency depend on importin beta concentration.

Authors:  Weidong Yang; Siegfried M Musser
Journal:  J Cell Biol       Date:  2006-09-18       Impact factor: 10.539

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  18 in total

Review 1.  How to operate a nuclear pore complex by Kap-centric control.

Authors:  Roderick Y H Lim; Binlu Huang; Larisa E Kapinos
Journal:  Nucleus       Date:  2015       Impact factor: 4.197

2.  The Role of Cohesiveness in the Permeability of the Spatial Assemblies of FG Nucleoporins.

Authors:  Chad Gu; Andrei Vovk; Tiantian Zheng; Rob D Coalson; Anton Zilman
Journal:  Biophys J       Date:  2019-03-07       Impact factor: 4.033

3.  Diffusion: molecular velcro in flatland.

Authors:  Jurriaan Huskens
Journal:  Nat Nanotechnol       Date:  2014-07       Impact factor: 39.213

4.  Investigating molecular crowding within nuclear pores using polarization-PALM.

Authors:  Guo Fu; Li-Chun Tu; Anton Zilman; Siegfried M Musser
Journal:  Elife       Date:  2017-09-26       Impact factor: 8.140

Review 5.  Macromolecular transport between the nucleus and the cytoplasm: Advances in mechanism and emerging links to disease.

Authors:  Elizabeth J Tran; Megan C King; Anita H Corbett
Journal:  Biochim Biophys Acta       Date:  2014-08-09

6.  Physics of the Nuclear Pore Complex: Theory, Modeling and Experiment.

Authors:  Bart W Hoogenboom; Loren E Hough; Edward A Lemke; Roderick Y H Lim; Patrick R Onck; Anton Zilman
Journal:  Phys Rep       Date:  2021-03-24       Impact factor: 30.510

Review 7.  Deciphering the Structure and Function of Nuclear Pores Using Single-Molecule Fluorescence Approaches.

Authors:  Siegfried M Musser; David Grünwald
Journal:  J Mol Biol       Date:  2016-03-02       Impact factor: 5.469

8.  Promiscuous binding of Karyopherinβ1 modulates FG nucleoporin barrier function and expedites NTF2 transport kinetics.

Authors:  Raphael S Wagner; Larisa E Kapinos; Neil J Marshall; Murray Stewart; Roderick Y H Lim
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

Review 9.  The Viral Capsid: A Master Key to Access the Host Nucleus.

Authors:  Guillermo Blanco-Rodriguez; Francesca Di Nunzio
Journal:  Viruses       Date:  2021-06-20       Impact factor: 5.048

10.  Plasticity of an ultrafast interaction between nucleoporins and nuclear transport receptors.

Authors:  Sigrid Milles; Davide Mercadante; Iker Valle Aramburu; Malene Ringkjøbing Jensen; Niccolò Banterle; Christine Koehler; Swati Tyagi; Jane Clarke; Sarah L Shammas; Martin Blackledge; Frauke Gräter; Edward A Lemke
Journal:  Cell       Date:  2015-10-08       Impact factor: 41.582

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