Literature DB >> 24928538

Purification, characterization, and crystallization of Crocodylus siamensis hemoglobin.

Jinda Jandaruang1, Jaruwan Siritapetawee, Chomphunuch Songsiriritthigul, Sutthidech Preecharram, Taoka Azuma, Apisak Dhiravisit, Yoshihiro Fukumori, Sompong Thammasirirak.   

Abstract

Crocodylus siamensis hemoglobin was purified by a size exclusion chromatography, Sephacryl S-100 with buffer containing dithiothreitol. The purified Hb was dissociated to be two forms (α chain and β chain) which observed by SDS-PAGE, indicated that the C. siamensis Hb was an unpolymerized form. The unpolymerized Hb (composed of two α chains and two β chains) showed high oxygen affinity at 3.13 mmHg (P(50)) and 1.96 (n value), and a small Bohr effect (δH(+) = -0.29) at a pH of 6.9-8.4. Adenosine triphosphate did not affect the oxygenation properties, whereas bicarbonate ions strongly depressed oxygen affinity. Crude C. siamensis Hb solutions were showed high O(2) affinity at P(50) of 2.5 mmHg which may assure efficient utilization of the lung O(2) reserve during breath holding and diving. The purified Hbs were changed to cyanmethemoglobin forms prior crystallization. Rod- and plate-shaped crystals were obtained by the sitting-drop vapor-diffusion method at 5 °C using equal volumes of protein solution (37 mg/ml) and reservoir [10-13 % (w/v) PEG 4000, with 0.1 M Tris buffer in present of 0.2 M MgCl(2)·6H(2)O] solution at a pH of 7.0-8.5.

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Year:  2014        PMID: 24928538     DOI: 10.1007/s10930-014-9569-7

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  18 in total

1.  Purification, crystallisation and preliminary X-ray study of haemoglobin from Crocodilis palustris and Crocodilis porosus.

Authors:  S Deepthi; A Johnson; R Sathish; V Pattabhi
Journal:  Biochim Biophys Acta       Date:  2000-07-14

2.  Complete amino acid sequence of globin chains and biological activity of fragmented crocodile hemoglobin (Crocodylus siamensis).

Authors:  Saowaluck Srihongthong; Anawat Pakdeesuwan; Sakda Daduang; Tomohiro Araki; Apisak Dhiravisit; Sompong Thammasirirak
Journal:  Protein J       Date:  2012-08       Impact factor: 2.371

3.  X-ray diffraction study of binding of 2,3-diphosphoglycerate to human deoxyhaemoglobin.

Authors:  A Arnone
Journal:  Nature       Date:  1972-05-19       Impact factor: 49.962

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Transplanting a unique allosteric effect from crocodile into human haemoglobin.

Authors:  N H Komiyama; G Miyazaki; J Tame; K Nagai
Journal:  Nature       Date:  1995-01-19       Impact factor: 49.962

6.  Comparative analysis of phosphoprotein expression using 2D-DIGE.

Authors:  Tomoya Asano; Takumi Nishiuchi
Journal:  Methods Mol Biol       Date:  2011

7.  Analysis of bicarbonate binding to crocodilian hemoglobin.

Authors:  C Bauer; M Forster; G Gros; A Mosca; M Perrella; H S Rollema; D Vogel
Journal:  J Biol Chem       Date:  1981-08-25       Impact factor: 5.157

8.  A novel allosteric mechanism in haemoglobin. Structure of bovine deoxyhaemoglobin, absence of specific chloride-binding sites and origin of the chloride-linked Bohr effect in bovine and human haemoglobin.

Authors:  M F Perutz; G Fermi; C Poyart; J Pagnier; J Kister
Journal:  J Mol Biol       Date:  1993-10-05       Impact factor: 5.469

9.  Oxygenation properties of extracellular giant hemoglobin from Oligobrachia mashikoi.

Authors:  Yayoi Aki; Taro Nakagawa; Masako Nagai; Yuichi Sasayama; Yoshihiro Fukumori; Kiyohiro Imai
Journal:  Biochem Biophys Res Commun       Date:  2007-06-29       Impact factor: 3.575

10.  Crystallization and preliminary X-ray structural studies of hemoglobin A2 and hemoglobin E, isolated from the blood samples of beta-thalassemic patients.

Authors:  Jhimli Dasgupta; Udayaditya Sen; Debi Choudhury; Poppy Datta; Abhijit Chakrabarti; Sudipa Basu Chakrabarty; Amit Chakrabarty; J K Dattagupta
Journal:  Biochem Biophys Res Commun       Date:  2003-04-04       Impact factor: 3.575

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  1 in total

1.  Cloning, Expression, and Characterization of Siamese Crocodile (Crocodylus siamensis) Hemoglobin from Escherichia coli and Pichia pastoris.

Authors:  Preeyanan Anwised; Nisachon Jangpromma; Theeranan Temsiripong; Rina Patramanon; Sakda Daduang; Sarawut Jitrapakdee; Tomohiro Araki; Sompong Klaynongsruang
Journal:  Protein J       Date:  2016-08       Impact factor: 2.371

  1 in total

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