Literature DB >> 24920426

N-glycoprotein surfaceomes of four developmentally distinct mouse cell types.

Erin M Kropp1, Subarna Bhattacharya, Matthew Waas, Sandra L Chuppa, Anna-Katerina Hadjantonakis, Kenneth R Boheler, Rebekah L Gundry.   

Abstract

PURPOSE: Detailed knowledge of cell surface proteins present during early embryonic development remains limited for most cell lineages. Due to the relevance of cell surface proteins in their functional roles controlling cell signaling and their utility as accessible, nongenetic markers for cell identification and sorting, the goal of this study was to provide new information regarding the cell surface proteins present during early mouse embryonic development. EXPERIMENTAL
DESIGN: Using the cell surface capture technology, the cell surface N-glycoproteomes of three cell lines and one in vitro differentiated cell type representing distinct cell fates and stages in mouse embryogenesis were assessed.
RESULTS: Altogether, more than 600 cell surface N-glycoproteins were identified represented by >5500 N-glycopeptides. CONCLUSIONS AND CLINICAL RELEVANCE: The development of new, informative cell surface markers for the reliable identification and isolation of functionally defined subsets of cells from early developmental stages will advance the use of stem cell technologies for mechanistic developmental studies, including disease modeling and drug discovery.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Biomarkers; Cardiovascular; Glycoproteins; Glycoproteomics; Plasma membrane

Mesh:

Substances:

Year:  2014        PMID: 24920426      PMCID: PMC4151168          DOI: 10.1002/prca.201400021

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN: 1862-8346            Impact factor:   3.494


  27 in total

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Journal:  J Proteome Res       Date:  2012-01-27       Impact factor: 4.466

2.  A cell surfaceome map for immunophenotyping and sorting pluripotent stem cells.

Authors:  Rebekah L Gundry; Daniel R Riordon; Yelena Tarasova; Sandra Chuppa; Subarna Bhattacharya; Ondrej Juhasz; Olena Wiedemeier; Samuel Milanovich; Fallon K Noto; Irina Tchernyshyov; Kimberly Raginski; Damaris Bausch-Fluck; Hyun-Jin Tae; Shannon Marshall; Stephen A Duncan; Bernd Wollscheid; Robert P Wersto; Sridhar Rao; Jennifer E Van Eyk; Kenneth R Boheler
Journal:  Mol Cell Proteomics       Date:  2012-04-06       Impact factor: 5.911

Review 3.  Hematopoietic stem and progenitor cells: clinical and preclinical regeneration of the hematolymphoid system.

Authors:  Judith A Shizuru; Robert S Negrin; Irving L Weissman
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4.  Protter: interactive protein feature visualization and integration with experimental proteomic data.

Authors:  Ulrich Omasits; Christian H Ahrens; Sebastian Müller; Bernd Wollscheid
Journal:  Bioinformatics       Date:  2013-10-24       Impact factor: 6.937

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Authors:  D Franco; W H Lamers; A F Moorman
Journal:  Cardiovasc Res       Date:  1998-04       Impact factor: 10.787

6.  Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.

Authors:  Bernd Wollscheid; Damaris Bausch-Fluck; Christine Henderson; Robert O'Brien; Miriam Bibel; Ralph Schiess; Ruedi Aebersold; Julian D Watts
Journal:  Nat Biotechnol       Date:  2009-04-06       Impact factor: 54.908

7.  Derivation of completely cell culture-derived mice from early-passage embryonic stem cells.

Authors:  A Nagy; J Rossant; R Nagy; W Abramow-Newerly; J C Roder
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

8.  Cell-surface proteomics identifies lineage-specific markers of embryo-derived stem cells.

Authors:  Peter J Rugg-Gunn; Brian J Cox; Fredrik Lanner; Parveen Sharma; Vladimir Ignatchenko; Angela C H McDonald; Jodi Garner; Anthony O Gramolini; Janet Rossant; Thomas Kislinger
Journal:  Dev Cell       Date:  2012-03-15       Impact factor: 12.270

9.  Embryonic stem cell-derived cardiomyocyte heterogeneity and the isolation of immature and committed cells for cardiac remodeling and regeneration.

Authors:  Kenneth R Boheler; Robert N Joodi; Hui Qiao; Ondrej Juhasz; Amanda L Urick; Sandra L Chuppa; Rebekah L Gundry; Robert P Wersto; Rong Zhou
Journal:  Stem Cells Int       Date:  2011-09-06       Impact factor: 5.443

10.  The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.

Authors:  Rebekah L Gundry; Kimberly Raginski; Yelena Tarasova; Irina Tchernyshyov; Damaris Bausch-Fluck; Steven T Elliott; Kenneth R Boheler; Jennifer E Van Eyk; Bernd Wollscheid
Journal:  Mol Cell Proteomics       Date:  2009-08-04       Impact factor: 5.911

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  9 in total

Review 1.  The quest of cell surface markers for stem cell therapy.

Authors:  Anna Meyfour; Sara Pahlavan; Mehdi Mirzaei; Jeroen Krijgsveld; Hossein Baharvand; Ghasem Hosseini Salekdeh
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2.  Cell Surface Proteomics of N-Linked Glycoproteins for Typing of Human Lymphocytes.

Authors:  Nicole A Haverland; Matthew Waas; Ioanna Ntai; Theodore Keppel; Rebekah L Gundry; Neil L Kelleher
Journal:  Proteomics       Date:  2017-10       Impact factor: 3.984

Review 3.  Hold or fold--proteins in advanced heart failure and myocardial recovery.

Authors:  Claudius Mahr; Rebekah L Gundry
Journal:  Proteomics Clin Appl       Date:  2015-01-02       Impact factor: 3.494

4.  Mass Spectrometry-Based Identification of Extracellular Domains of Cell Surface N-Glycoproteins: Defining the Accessible Surfaceome for Immunophenotyping Stem Cells and Their Derivatives.

Authors:  Chelsea M Fujinaka; Matthew Waas; Rebekah L Gundry
Journal:  Methods Mol Biol       Date:  2018

5.  N-glycoprotein surfaceome of human induced pluripotent stem cell derived hepatic endoderm.

Authors:  Sunil K Mallanna; Matthew Waas; Stephen A Duncan; Rebekah L Gundry
Journal:  Proteomics       Date:  2017-02-01       Impact factor: 3.984

Review 6.  Cell surface markers for immunophenotyping human pluripotent stem cell-derived cardiomyocytes.

Authors:  Kenneth R Boheler; Ellen Ngar-Yun Poon
Journal:  Pflugers Arch       Date:  2021-04-30       Impact factor: 3.657

Review 7.  Concise Review: Cell Surface N-Linked Glycoproteins as Potential Stem Cell Markers and Drug Targets.

Authors:  Kenneth R Boheler; Rebekah L Gundry
Journal:  Stem Cells Transl Med       Date:  2016-07-28       Impact factor: 6.940

8.  Biophysical subsets of embryonic stem cells display distinct phenotypic and morphological signatures.

Authors:  Tom Bongiorno; Jeremy Gura; Priyanka Talwar; Dwight Chambers; Katherine M Young; Dalia Arafat; Gonghao Wang; Emily L Jackson-Holmes; Peng Qiu; Todd C McDevitt; Todd Sulchek
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9.  The in silico human surfaceome.

Authors:  Damaris Bausch-Fluck; Ulrich Goldmann; Sebastian Müller; Marc van Oostrum; Maik Müller; Olga T Schubert; Bernd Wollscheid
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-29       Impact factor: 11.205

  9 in total

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