Literature DB >> 24920110

Quantitative analyses of the plant cytoskeleton reveal underlying organizational principles.

David Breuer1, Alexander Ivakov2, Arun Sampathkumar3, Florian Hollandt1, Staffan Persson4, Zoran Nikoloski5.   

Abstract

The actin and microtubule (MT) cytoskeletons are vital structures for cell growth and development across all species. While individual molecular mechanisms underpinning actin and MT dynamics have been intensively studied, principles that govern the cytoskeleton organization remain largely unexplored. Here, we captured biologically relevant characteristics of the plant cytoskeleton through a network-driven imaging-based approach allowing us to quantitatively assess dynamic features of the cytoskeleton. By introducing suitable null models, we demonstrate that the plant cytoskeletal networks exhibit properties required for efficient transport, namely, short average path lengths and high robustness. We further show that these advantageous features are maintained during temporal cytoskeletal rearrangements. Interestingly, man-made transportation networks exhibit similar properties, suggesting general laws of network organization supporting diverse transport processes. The proposed network-driven analysis can be readily used to identify organizational principles of cytoskeletons in other organisms.
© 2014 The Author(s) Published by the Royal Society. All rights reserved.

Entities:  

Keywords:  complex networks; cytoskeletal networks; cytoskeletal transport; organizational principles; plant cell walls

Mesh:

Year:  2014        PMID: 24920110      PMCID: PMC4208369          DOI: 10.1098/rsif.2014.0362

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  55 in total

1.  Simple rules yield complex food webs.

Authors:  R J Williams; N D Martinez
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

2.  The small world of metabolism.

Authors:  D A Fell; A Wagner
Journal:  Nat Biotechnol       Date:  2000-11       Impact factor: 54.908

3.  Mechanotransduction through the cytoskeleton.

Authors:  Yinon Shafrir; Gabor Forgacs
Journal:  Am J Physiol Cell Physiol       Date:  2002-03       Impact factor: 4.249

4.  Scale-invariant behavior and vascular network formation in normal and tumor tissue.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-09-18       Impact factor: 9.161

5.  Survival of the aligned: ordering of the plant cortical microtubule array.

Authors:  Simon H Tindemans; Rhoda J Hawkins; Bela M Mulder
Journal:  Phys Rev Lett       Date:  2010-02-05       Impact factor: 9.161

Review 6.  Control of the actin cytoskeleton in plant cell growth.

Authors:  Patrick J Hussey; Tijs Ketelaar; Michael J Deeks
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

Review 7.  Distributed hierarchical processing in the primate cerebral cortex.

Authors:  D J Felleman; D C Van Essen
Journal:  Cereb Cortex       Date:  1991 Jan-Feb       Impact factor: 5.357

Review 8.  Microtubule dynamics and organization in the plant cortical array.

Authors:  David W Ehrhardt; Sidney L Shaw
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

9.  Trafficking and signaling through the cytoskeleton: a specific mechanism.

Authors:  Y Shafrir; D ben-Avraham; G Forgacs
Journal:  J Cell Sci       Date:  2000-08       Impact factor: 5.285

10.  Pausing of Golgi bodies on microtubules regulates secretion of cellulose synthase complexes in Arabidopsis.

Authors:  Elizabeth Faris Crowell; Volker Bischoff; Thierry Desprez; Aurélia Rolland; York-Dieter Stierhof; Karin Schumacher; Martine Gonneau; Herman Höfte; Samantha Vernhettes
Journal:  Plant Cell       Date:  2009-04-17       Impact factor: 12.085

View more
  3 in total

1.  System-wide organization of actin cytoskeleton determines organelle transport in hypocotyl plant cells.

Authors:  David Breuer; Jacqueline Nowak; Alexander Ivakov; Marc Somssich; Staffan Persson; Zoran Nikoloski
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-27       Impact factor: 11.205

2.  Auxin-induced actin cytoskeleton rearrangements require AUX1.

Authors:  Ruthie S Arieti; Christopher J Staiger
Journal:  New Phytol       Date:  2020-02-11       Impact factor: 10.151

3.  DeFiNe: an optimisation-based method for robust disentangling of filamentous networks.

Authors:  David Breuer; Zoran Nikoloski
Journal:  Sci Rep       Date:  2015-12-15       Impact factor: 4.379

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.