| Literature DB >> 24912407 |
Qian Zhang, Xinhua Xiao1, Ming Li, Wenhui Li, Miao Yu, Huabing Zhang, Fan Ping, Zhixin Wang, Jia Zheng.
Abstract
BACKGROUND: Berberine is known to improve glucose and lipid metabolism disorders, but it poorly absorbed into the blood stream from the gut. Therefore, the exact underlying mechanism for berberine is still unknown. In this study, we investigated the effect of berberine on glucose metabolism in diabetic rats and tested the hypothesis that berberine acts directly in the terminal ileums.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24912407 PMCID: PMC4057525 DOI: 10.1186/1472-6882-14-188
Source DB: PubMed Journal: BMC Complement Altern Med ISSN: 1472-6882 Impact factor: 3.659
Olgonucleotide sequences for Q-PCR
| CATCGTGGTATCCAAACTGA | GCTCGTCCATCACAAAGG | |
| TGGTATCCCTTTGGCTTTCA | TCCTCCTCCTTGCCCATCTC | |
| TTGTTGATGGCTGAGCAGTGA | AAGCCCGTCCTTGGAGGAAAT | |
| TCGAGACCGTTTCAGTCCAT | CCACGGACCAAATATCCACT | |
| GACCCCTTCATTGACCTCAAC | CGCTCCTGGAAGATGGTGATG |
Glp1r: glucagon-like peptide 1 receptor; Gnrh1: gonadotropin releasing hormone 1; Gnrhr: gonadotropin releasing hormone receptor; Mapk10: mitogen activated protein kinase 10.
Figure 1The body weight (A) and fasting blood glucose (B) before and after berberine treatment in the rats (n = 8, in each group). Data represent mean ± S. D. (n = 8). *P < 0.05, **P < 0.01 versus the control group; #P < 0.05 versus DM group.
Figure 2The effect of berberine on oral glucose tolerance test blood glucose (A) and AUC (B) in rats (n = 8, in each group). Data represent mean ± S. D. (n = 8). **P < 0.01 versus the control group; #P < 0.05 versus DM group.
Figure 3The effect of berberine on serum fasting insulin (A), HOMA-IR (B) and plasma postprandial GLP-1 (C) in rats (n = 8, in each group). Data represent mean ± S. D. (n = 8). **P < 0.01 versus the control group; # P < 0.05, ##P < 0.01 versus DM group.
Gene ontology groups with significant over-representation among genes with significantly changed expression in the BerH (FDR < 0.001)
| Biological process | Intracellular signaling cascade | GO:0007242 | 60 | 7.195 | 1.61E-18 |
| Phosphate metabolic process | GO:0006796 | 55 | 7.186 | 1.06E-17 | |
| Phosphorus metabolic process | GO:0006793 | 55 | 7.169 | 1.20E-17 | |
| Protein kinase cascade | GO:0007243 | 34 | 14.126 | 7.10E-16 | |
| Regulation of phosphorylation | GO:0042325 | 37 | 10.287 | 1.03E-15 | |
| Regulation of phosphate metabolic process | GO:0019220 | 37 | 9.890 | 4.11E-15 | |
| Regulation of phosphorus metabolic process | GO:0051174 | 37 | 9.890 | 4.11E-15 | |
| Protein amino acid phosphorylation | GO:0006468 | 42 | 7.539 | 2.09E-14 | |
| Regulation of kinase activity | GO:0043549 | 32 | 12.455 | 2.41E-14 | |
| Regulation of transferase activity | GO:0051338 | 32 | 11.872 | 1.06E-13 | |
| Response to organic substance | GO:0010033 | 48 | 5.738 | 2.16E-13 | |
| Regulation of protein kinase activity | GO:0045859 | 30 | 12.280 | 1.81E-12 | |
| Phosphorylation | GO:0016310 | 42 | 6.516 | 5.62E-12 | |
| MAPKKK cascade | GO:0000165 | 24 | 18.618 | 9.75E-12 | |
| Positive regulation of kinase activity | GO:0033674 | 26 | 14.494 | 5.94E-11 | |
| Positive regulation of transferase activity | GO:0051347 | 26 | 13.866 | 1.81E-10 | |
| Response to endogenous stimulus | GO:0009719 | 37 | 7.163 | 2.64E-10 | |
| Positive regulation of molecular function | GO:0044093 | 34 | 7.439 | 6.39E-09 | |
| Positive regulation of protein kinase activity | GO:0045860 | 24 | 13.939 | 8.79E-09 | |
| Positive regulation of catalytic activity | GO:0043085 | 32 | 7.995 | 1.47E-08 | |
| Response to hormone stimulus | GO:0009725 | 33 | 7.178 | 8.01E-08 | |
| Regulation of apoptosis | GO:0042981 | 32 | 5.243 | 2.47E-06 | |
| Regulation of programmed cell death | GO:0043067 | 32 | 5.174 | 3.54E-06 | |
| Regulation of cell death | GO:0010941 | 32 | 5.152 | 4.01E-06 | |
| Activation of protein kinase A activity | GO:0034199 | 9 | 66.561 | 3.21E-05 | |
| Enzyme linked receptor protein signaling pathway | GO:0007167 | 21 | 8.320 | 7.94E-05 | |
| Regulation of MAP kinase activity | GO:0043405 | 15 | 14.469 | 2.47E-04 | |
| Cellular response to hormone stimulus | GO:0032870 | 16 | 12.588 | 2.76E-04 | |
| Negative regulation of catalytic activity | GO:0043086 | 19 | 9.007 | 3.78E-04 | |
| cAMP biosynthetic process | GO:0006171 | 8 | 73.957 | 4.80E-04 | |
| Activation of protein kinase activity | GO:0032147 | 14 | 15.687 | 6.06E-04 | |
| Cellular constituent | Cytosol | GO:0005829 | 46 | 4.618 | 4.08E-17 |
| Cell fraction | GO:0000267 | 32 | 3.714 | 9.48E-08 | |
| Nucleoplasm | GO:0005654 | 25 | 4.037 | 5.43E-06 | |
| Insoluble fraction | GO:0005626 | 25 | 3.716 | 2.73E-05 | |
| Soluble fraction | GO:0005625 | 16 | 6.026 | 5.40E-05 | |
| Organelle lumen | GO:0043233 | 31 | 2.849 | 1.12E-04 | |
| Plasma membrane | GO:0005886 | 45 | 2.108 | 1.93E-04 | |
| Membrane-enclosed lumen | GO:0031974 | 31 | 2.772 | 2.06E-04 | |
| Nuclear lumen | GO:0031981 | 26 | 3.148 | 3.24E-04 | |
| Intracellular organelle lumen | GO:0070013 | 28 | 2.668 | 0.002417965 | |
| Molecular function | Protein kinase activity | GO:0004672 | 38 | 7.617 | 4.54E-12 |
| Purine ribonucleotide binding | GO:0032555 | 53 | 3.841 | 1.29E-11 | |
| Ribonucleotide binding | GO:0032553 | 53 | 3.839 | 1.33E-11 | |
| Protein serine/threonine kinase activity | GO:0004674 | 30 | 8.615 | 2.66E-11 | |
| Purine nucleotide binding | GO:0017076 | 53 | 3.660 | 1.11E-10 | |
| ATP binding | GO:0005524 | 46 | 4.169 | 6.83E-10 | |
| Adenyl ribonucleotide binding | GO:0032559 | 46 | 4.087 | 1.47E-09 | |
| Adenyl nucleotide binding | GO:0030554 | 46 | 3.856 | 1.44E-08 | |
| Purine nucleoside binding | GO:0001883 | 46 | 3.789 | 2.78E-08 | |
| Nucleoside binding | GO:0001882 | 46 | 3.759 | 5.66E-08 | |
| Nucleotide binding | GO:0000166 | 53 | 3.059 | 3.25E-07 | |
| MAP kinase activity | GO:0004707 | 9 | 59.748 | 7.78E-06 | |
| Adenylate cyclase activity | GO:0004016 | 8 | 82.079 | 1.34E-05 | |
| Phosphoprotein phosphatase activity | GO:0004721 | 15 | 13.329 | 5.76E-05 | |
| Kinase binding | GO:0019900 | 16 | 10.031 | 5.56E-04 |
KEGG pathway (FDR < 0.001, Fold enrichment > 2.0)
| rno04010 | MAPK signaling pathway | 95 | 266 | 17.985 | 3.26E-19 | RGD1565395, HRAS, PDGFA, TGFB3, NFKB1, FGF12, NFKB2, DAXX, TGFB1, TGFB2, AKT1, CDC42, FOS, CASP3, MOS, RRAS, PRKACA, PRKACB, FAS, MAP2K7, AKT3, AKT2, MAP2K5, EGFR, PRKCA, RELA, PTPRR, TP53, FLNC, ECSIT, FLNB, PRKCB, MAPK1, MAP4K4, RASGRF1, JUN, MAPK3, PDGFRA, HSPB1, MAPK9, PDGFRB, MAPK8, MAP3K14, GADD45A, FGFR2, FGFR1, TRAF2, GRB2, MRAS, MAPKAPK5, MKNK2, DUSP10, ELK1, HSPA1A, HSPA1B, MAPKAPK2, HSPA1L, TNFRSF1A, HSPA2, ELK4, SOS1, SOS2, DUSP16, RAC1, PPP3CB, PPP3CC, PPP3CA, CHP, HSPA8, PTPN7, MAP2K1, MAP2K2, PTPN5, MAP2K3, NLK, MAP2K4, TAOK3, NR4A1, RAF1, MAPK10, DUSP5, NRAS, DUSP4, DUSP3, ATF4, DUSP2, DUSP1, MAPK14, NTRK2, IKBKG, MAPK8IP3, DUSP9, IKBKB, CRK, DUSP7, DUSP6 |
| rno04912 | GnRH signaling pathway | 42 | 94 | 22.501 | 1.01E-13 | ADCY3, ADCY4, ADCY1, HRAS, ADCY2, ADCY7, GRB2, ADCY5, GNA11, ADCY6, ELK1, GNRHR, MMP2, CDC42, PTK2B, SOS1, SOS2, PRKACA, PRKACB, MAP2K7, EGFR, PRKCA, GNRH1, MAP2K1, MAP2K2, MAP2K3, MAP2K4, RAF1, MAPK10, MMP14, PRKCD, PRKCB, MAPK1, NRAS, ATF4, GNAQ, ADCY9, JUN, MAPK14, MAPK3, MAPK9, MAPK8 |
| rno04540 | Gap junction | 29 | 81 | 18.030 | 9.06E-11 | ADCY3, ADCY4, ADCY1, HRAS, ADCY2, ADCY7, PDGFA, GRB2, ADCY5, GNA11, ADCY6, SOS1, SOS2, PRKACA, PRKACB, MAP2K5, PRKCA, EGFR, MAP2K1, MAP2K2, RAF1, PRKCB, NRAS, MAPK1, ADCY9, GNAQ, MAPK3, PDGFRA, PDGFRB |
| rno04722 | Neurotrophin signaling pathway | 31 | 126 | 12.390 | 2.14E-09 | HRAS, GRB2, NFKB1, MAPKAPK2, AKT1, CDC42, SOS1, RAC1, SOS2, MAP2K7, AKT3, AKT2, MAP2K5, MAP2K1, MAP2K2, RELA, TP53, RAF1, MAPK10, PRKCD, NRAS, MAPK1, ATF4, JUN, MAPK14, MAPK3, NTRK2, MAPK9, MAPK8, IKBKB, CRK |
| rno05200 | Pathways in cancer | 43 | 317 | 6.831 | 4.57E-08 | FGFR2, TRAF2, FGFR1, HRAS, PDGFA, GRB2, TGFB3, NFKB1, FGF12, NFKB2, MMP2, TGFB1, TGFB2, AKT1, CDC42, FOS, CASP3, SOS1, SOS2, RAC1, FAS, AKT3, AKT2, EGFR, PRKCA, MAP2K1, MAP2K2, RELA, TP53, RAF1, MAPK10, PRKCB, MAPK1, NRAS, JUN, IKBKG, MAPK3, PDGFRA, PDGFRB, MAPK9, MAPK8, IKBKB, CRK |
| rno04662 | B cell receptor signaling pathway | 25 | 75 | 16.786 | 9.81E-07 | HRAS, GRB2, NFKB1, AKT1, FOS, SOS1, RAC1, SOS2, PPP3CB, PPP3CC, CHP, PPP3CA, AKT3, AKT2, MAP2K1, MAP2K2, RELA, RAF1, PRKCB, NRAS, MAPK1, JUN, MAPK3, IKBKG, IKBKB |
| rno04660 | T cell receptor signaling pathway | 28 | 109 | 12.936 | 2.43E-06 | HRAS, GRB2, NFKB1, AKT1, CDC42, FOS, SOS1, SOS2, PPP3CB, PPP3CC, PPP3CA, CHP, MAP2K7, AKT3, AKT2, MAP2K1, MAP2K2, RELA, RAF1, NRAS, MAPK1, JUN, MAPK14, IKBKG, MAPK3, MAPK9, IKBKB, MAP3K14 |
| rno04062 | Chemokine signaling pathway | 32 | 171 | 9.424 | 2.04E-05 | ADCY3, ADCY4, ADCY1, HRAS, ADCY2, ADCY7, GRB2, ADCY5, ADCY6, NFKB1, AKT1, CDC42, PTK2B, SOS1, SOS2, RAC1, PRKACA, PRKACB, AKT3, AKT2, MAP2K1, RELA, RAF1, PRKCD, PRKCB, NRAS, MAPK1, ADCY9, IKBKG, MAPK3, IKBKB, CRK |
| rno05215 | Prostate cancer | 25 | 90 | 13.988 | 1.32E-04 | FGFR2, FGFR1, HRAS, PDGFA, GRB2, NFKB1, AKT1, SOS1, SOS2, AKT3, AKT2, EGFR, MAP2K1, MAP2K2, RELA, TP53, RAF1, NRAS, MAPK1, ATF4, IKBKG, MAPK3, PDGFRA, PDGFRB, IKBKB |
Figure 4The iluem immunohistochemistry for GLP1R and MAPK10 expression (original magnification × 200) and semiquantitative assessments. A-B Immunostaining for GLP1R. C-D immunostaining for MAPK10. Iluem were harvested form DM (A, C) and berH group (B, D). (E) Semiquatitatve scores of GLP1R and MAPK10. Data represent mean ± SD (n = 6). #P < 0.05 versus DM group.
Fold change in gene expression measured by gene array and Q-RT-PCR
| 3.862 | 4.6 ± 0.3 | 0.027 | 4.231 | 4.3 ± 0.2 | 0.026 | |
| −4.615 | −3.7 ± 0.2 | 0.038 | −3.758 | −3.5 ± 0.3 | 0.025 | |
| −3.715 | −3.1 ± 0.4 | 0.014 | −3.271 | −2.9 ± 0.4 | 0.039 | |
| 6.362 | 5.9 ± 0.3 | 0.031 | 5.837 | 6.2 ± 0.5 | 0.015 | |
Glp1r: glucagon-like peptide 1 receptor; Gnrh1: gonadotropin-releasing hormone 1; Gnrhr: gonadotropin releasing hormone receptor; Mapk10: mitogen activated protein kinase 10.
Each Q-RT-PCR assay was repeated using three biological replicates and each analysis consisted of three technical replicates.