Literature DB >> 24912190

Genome-wide RNAi screen identifies the Parkinson disease GWAS risk locus SREBF1 as a regulator of mitophagy.

Rachael M Ivatt1, Alvaro Sanchez-Martinez1, Vinay K Godena1, Stephen Brown2, Elena Ziviani3, Alexander J Whitworth4.   

Abstract

Genetic analysis of Parkinson disease (PD) has identified several genes whose mutation causes inherited parkinsonism, as well as risk loci for sporadic PD. PTEN-induced kinase 1 (PINK1) and parkin, linked to autosomal recessive PD, act in a common genetic pathway regulating the autophagic degradation of mitochondria, termed mitophagy. We undertook a genome-wide RNAi screen as an unbiased approach to identify genes regulating the PINK1/Parkin pathway. We identified several genes that have a conserved function in promoting mitochondrial translocation of Parkin and subsequent mitophagy, most notably sterol regulatory element binding transcription factor 1 (SREBF1), F-box and WD40 domain protein 7 (FBXW7), and other components of the lipogenesis pathway. The relevance of mechanisms of autosomal recessive parkinsonism to sporadic PD has long been debated. However, with the recent identification of SREBF1 as a risk locus for sporadic PD, our findings suggest a common mechanistic link between autosomal recessive and sporadic PD, and underscore the importance of mitochondrial homeostasis.

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Year:  2014        PMID: 24912190      PMCID: PMC4060696          DOI: 10.1073/pnas.1321207111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

Review 1.  Mechanisms of mitophagy.

Authors:  Richard J Youle; Derek P Narendra
Journal:  Nat Rev Mol Cell Biol       Date:  2011-01       Impact factor: 94.444

2.  Phosphorylation and ubiquitination of the transcription factor sterol regulatory element-binding protein-1 in response to DNA binding.

Authors:  Tanel Punga; Maria T Bengoechea-Alonso; Johan Ericsson
Journal:  J Biol Chem       Date:  2006-07-06       Impact factor: 5.157

3.  PINK1 stabilized by mitochondrial depolarization recruits Parkin to damaged mitochondria and activates latent Parkin for mitophagy.

Authors:  Noriyuki Matsuda; Shigeto Sato; Kahori Shiba; Kei Okatsu; Keiko Saisho; Clement A Gautier; Yu-Shin Sou; Shinji Saiki; Sumihiro Kawajiri; Fumiaki Sato; Mayumi Kimura; Masaaki Komatsu; Nobutaka Hattori; Keiji Tanaka
Journal:  J Cell Biol       Date:  2010-04-19       Impact factor: 10.539

4.  Design and evaluation of genome-wide libraries for RNA interference screens.

Authors:  Thomas Horn; Thomas Sandmann; Michael Boutros
Journal:  Genome Biol       Date:  2010-06-15       Impact factor: 13.583

5.  Fbw7α and Fbw7γ collaborate to shuttle cyclin E1 into the nucleolus for multiubiquitylation.

Authors:  Nimesh Bhaskaran; Frank van Drogen; Hwee-Fang Ng; Raman Kumar; Susanna Ekholm-Reed; Matthias Peter; Olle Sangfelt; Steven I Reed
Journal:  Mol Cell Biol       Date:  2012-10-29       Impact factor: 4.272

6.  Parkin- and PINK1-Dependent Mitophagy in Neurons: Will the Real Pathway Please Stand Up?

Authors:  Karl Grenier; Gian-Luca McLelland; Edward A Fon
Journal:  Front Neurol       Date:  2013-07-19       Impact factor: 4.003

7.  PINK1 autophosphorylation upon membrane potential dissipation is essential for Parkin recruitment to damaged mitochondria.

Authors:  Kei Okatsu; Toshihiko Oka; Masahiro Iguchi; Kenji Imamura; Hidetaka Kosako; Naoki Tani; Mayumi Kimura; Etsu Go; Fumika Koyano; Manabu Funayama; Kahori Shiba-Fukushima; Shigeto Sato; Hideaki Shimizu; Yuko Fukunaga; Hisaaki Taniguchi; Masaaki Komatsu; Nobutaka Hattori; Katsuyoshi Mihara; Keiji Tanaka; Noriyuki Matsuda
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

8.  PINK1-mediated phosphorylation of the Parkin ubiquitin-like domain primes mitochondrial translocation of Parkin and regulates mitophagy.

Authors:  Kahori Shiba-Fukushima; Yuzuru Imai; Shigeharu Yoshida; Yasushi Ishihama; Tomoko Kanao; Shigeto Sato; Nobutaka Hattori
Journal:  Sci Rep       Date:  2012-12-19       Impact factor: 4.379

9.  Advances in genome-wide RNAi cellular screens: a case study using the Drosophila JAK/STAT pathway.

Authors:  Katherine H Fisher; Victoria M Wright; Amy Taylor; Martin P Zeidler; Stephen Brown
Journal:  BMC Genomics       Date:  2012-09-24       Impact factor: 3.969

10.  Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.

Authors:  Derek Narendra; Atsushi Tanaka; Der-Fen Suen; Richard J Youle
Journal:  J Cell Biol       Date:  2008-11-24       Impact factor: 10.539

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  51 in total

Review 1.  Autophagosome dynamics in neurodegeneration at a glance.

Authors:  Yvette C Wong; Erika L F Holzbaur
Journal:  J Cell Sci       Date:  2015-04-01       Impact factor: 5.285

Review 2.  Iron and Neurodegeneration: Is Ferritinophagy the Link?

Authors:  Giorgio Biasiotto; Diego Di Lorenzo; Silvana Archetti; Isabella Zanella
Journal:  Mol Neurobiol       Date:  2015-10-14       Impact factor: 5.590

3.  In Situ Peroxidase Labeling and Mass-Spectrometry Connects Alpha-Synuclein Directly to Endocytic Trafficking and mRNA Metabolism in Neurons.

Authors:  Chee Yeun Chung; Vikram Khurana; Song Yi; Nidhi Sahni; Ken H Loh; Pavan K Auluck; Valeriya Baru; Namrata D Udeshi; Yelena Freyzon; Steven A Carr; David E Hill; Marc Vidal; Alice Y Ting; Susan Lindquist
Journal:  Cell Syst       Date:  2017-01-25       Impact factor: 10.304

Review 4.  Autophagy: A Lysosome-Dependent Process with Implications in Cellular Redox Homeostasis and Human Disease.

Authors:  Stefan W Ryter; Divya Bhatia; Mary E Choi
Journal:  Antioxid Redox Signal       Date:  2018-03-28       Impact factor: 8.401

Review 5.  Mitophagy in Human Diseases.

Authors:  Laura Doblado; Claudia Lueck; Claudia Rey; Alejandro K Samhan-Arias; Ignacio Prieto; Alessandra Stacchiotti; Maria Monsalve
Journal:  Int J Mol Sci       Date:  2021-04-09       Impact factor: 5.923

Review 6.  Beyond mitophagy: cytosolic PINK1 as a messenger of mitochondrial health.

Authors:  Erin K Steer; Michelle K Dail; Charleen T Chu
Journal:  Antioxid Redox Signal       Date:  2015-02-18       Impact factor: 8.401

Review 7.  Genetic perspective on the role of the autophagy-lysosome pathway in Parkinson disease.

Authors:  Ziv Gan-Or; Patrick A Dion; Guy A Rouleau
Journal:  Autophagy       Date:  2015       Impact factor: 16.016

Review 8.  Mechanisms of selective autophagy and mitophagy: Implications for neurodegenerative diseases.

Authors:  Charleen T Chu
Journal:  Neurobiol Dis       Date:  2018-07-17       Impact factor: 5.996

Review 9.  Mitochondrial function and autophagy: integrating proteotoxic, redox, and metabolic stress in Parkinson's disease.

Authors:  Jianhua Zhang; Matilda Lillian Culp; Jason G Craver; Victor Darley-Usmar
Journal:  J Neurochem       Date:  2018-02-14       Impact factor: 5.372

10.  Autosomal dominant retinitis pigmentosa-associated gene PRPF8 is essential for hypoxia-induced mitophagy through regulating ULK1 mRNA splicing.

Authors:  Guang Xu; Ting Li; Jiayi Chen; Changyan Li; Haixin Zhao; Chengcheng Yao; Hua Dong; Kaiqing Wen; Kai Wang; Jie Zhao; Qing Xia; Tao Zhou; Huafeng Zhang; Ping Gao; Ailing Li; Xin Pan
Journal:  Autophagy       Date:  2018-08-13       Impact factor: 16.016

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