Literature DB >> 24912168

Commonness and rarity in the marine biosphere.

Sean R Connolly1, M Aaron MacNeil2, M Julian Caley2, Nancy Knowlton3, Ed Cripps4, Mizue Hisano5, Loïc M Thibaut5, Bhaskar D Bhattacharya6, Lisandro Benedetti-Cecchi7, Russell E Brainard8, Angelika Brandt9, Fabio Bulleri7, Kari E Ellingsen10, Stefanie Kaiser11, Ingrid Kröncke12, Katrin Linse13, Elena Maggi7, Timothy D O'Hara14, Laetitia Plaisance15, Gary C B Poore14, Santosh K Sarkar6, Kamala K Satpathy16, Ulrike Schückel12, Alan Williams17, Robin S Wilson14.   

Abstract

Explaining patterns of commonness and rarity is fundamental for understanding and managing biodiversity. Consequently, a key test of biodiversity theory has been how well ecological models reproduce empirical distributions of species abundances. However, ecological models with very different assumptions can predict similar species abundance distributions, whereas models with similar assumptions may generate very different predictions. This complicates inferring processes driving community structure from model fits to data. Here, we use an approximation that captures common features of "neutral" biodiversity models--which assume ecological equivalence of species--to test whether neutrality is consistent with patterns of commonness and rarity in the marine biosphere. We do this by analyzing 1,185 species abundance distributions from 14 marine ecosystems ranging from intertidal habitats to abyssal depths, and from the tropics to polar regions. Neutrality performs substantially worse than a classical nonneutral alternative: empirical data consistently show greater heterogeneity of species abundances than expected under neutrality. Poor performance of neutral theory is driven by its consistent inability to capture the dominance of the communities' most-abundant species. Previous tests showing poor performance of a neutral model for a particular system often have been followed by controversy about whether an alternative formulation of neutral theory could explain the data after all. However, our approach focuses on common features of neutral models, revealing discrepancies with a broad range of empirical abundance distributions. These findings highlight the need for biodiversity theory in which ecological differences among species, such as niche differences and demographic trade-offs, play a central role.

Entities:  

Keywords:  Poisson-lognormal distribution; marine macroecology; metacommunities; species coexistence

Mesh:

Year:  2014        PMID: 24912168      PMCID: PMC4060690          DOI: 10.1073/pnas.1406664111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Predicted correspondence between species abundances and dendrograms of niche similarities.

Authors:  George Sugihara; Louis-Félix Bersier; T Richard E Southwood; Stuart L Pimm; Robert M May
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-17       Impact factor: 11.205

2.  Global correlations in tropical tree species richness and abundance reject neutrality.

Authors:  Robert E Ricklefs; Susanne S Renner
Journal:  Science       Date:  2012-01-27       Impact factor: 47.728

3.  Towards a unification of unified theories of biodiversity.

Authors:  Brian J McGill
Journal:  Ecol Lett       Date:  2010-03-10       Impact factor: 9.492

4.  Coexistence of perennial plants: an embarrassment of niches.

Authors:  Peter B Adler; Stephen P Ellner; Jonathan M Levine
Journal:  Ecol Lett       Date:  2010-06-10       Impact factor: 9.492

Review 5.  The merits of neutral theory.

Authors:  David Alonso; Rampal S Etienne; Alan J McKane
Journal:  Trends Ecol Evol       Date:  2006-06-12       Impact factor: 17.712

6.  Self-organized similarity, the evolutionary emergence of groups of similar species.

Authors:  Marten Scheffer; Egbert H van Nes
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-03       Impact factor: 11.205

7.  Coral reef diversity refutes the neutral theory of biodiversity.

Authors:  Maria Dornelas; Sean R Connolly; Terence P Hughes
Journal:  Nature       Date:  2006-03-02       Impact factor: 49.962

8.  Population dynamic models generating the lognormal species abundance distribution.

Authors:  S Engen; R Lande
Journal:  Math Biosci       Date:  1996-03       Impact factor: 2.144

Review 9.  Species diversity and community similarity in fluctuating environments: parametric approaches using species abundance distributions.

Authors:  Bernt-Erik Sæther; Steinar Engen; Vidar Grøtan
Journal:  J Anim Ecol       Date:  2013-04-11       Impact factor: 5.091

10.  Community inertia of Quaternary small mammal assemblages in North America.

Authors:  Brian J McGill; Elizabeth A Hadly; Brian A Maurer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-31       Impact factor: 11.205

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  22 in total

Review 1.  Ecology and exploration of the rare biosphere.

Authors:  Michael D J Lynch; Josh D Neufeld
Journal:  Nat Rev Microbiol       Date:  2015-03-02       Impact factor: 60.633

2.  The distribution and role of functional abundance in cross-scale resilience.

Authors:  Shana M Sundstrom; David G Angeler; Chris Barichievy; Tarsha Eason; Ahjond Garmestani; Lance Gunderson; Melinda Knutson; Kirsty L Nash; Trisha Spanbauer; Craig Stow; Craig R Allen
Journal:  Ecology       Date:  2018-09-28       Impact factor: 5.499

3.  Understanding how biodiversity unfolds through time under neutral theory.

Authors:  Olivier Missa; Calvin Dytham; Hélène Morlon
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-04-05       Impact factor: 6.237

4.  Niche and Neutrality Work Differently in Microbial Communities in Fluidic and Non-fluidic Ecosystems.

Authors:  Lixiao Wang; Maozhen Han; Xi Li; Amjed Ginawi; Kang Ning; Yunjun Yan
Journal:  Microb Ecol       Date:  2019-09-11       Impact factor: 4.552

Review 5.  Neutral syndrome.

Authors:  Armand M Leroi; Ben Lambert; James Rosindell; Xiangyu Zhang; Giorgos D Kokkoris
Journal:  Nat Hum Behav       Date:  2020-05-11

6.  The shape of terrestrial abundance distributions.

Authors:  John Alroy
Journal:  Sci Adv       Date:  2015-09-25       Impact factor: 14.136

7.  An extensive comparison of species-abundance distribution models.

Authors:  Elita Baldridge; David J Harris; Xiao Xiao; Ethan P White
Journal:  PeerJ       Date:  2016-12-22       Impact factor: 2.984

8.  Earthquake impacts on microcrustacean communities inhabiting groundwater-fed springs alter species-abundance distribution patterns.

Authors:  Simone Fattorini; Tiziana Di Lorenzo; Diana M P Galassi
Journal:  Sci Rep       Date:  2018-01-24       Impact factor: 4.379

9.  Direct evidence that density-dependent regulation underpins the temporal stability of abundant species in a diverse animal community.

Authors:  Peter A Henderson; Anne E Magurran
Journal:  Proc Biol Sci       Date:  2014-09-22       Impact factor: 5.349

10.  Communities as cliques.

Authors:  Yael Fried; David A Kessler; Nadav M Shnerb
Journal:  Sci Rep       Date:  2016-10-19       Impact factor: 4.379

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